Sequencing meta data

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    Ignored:    .Rproj.user/
    Ignored:    output/.DS_Store

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Unstaged changes:
    Modified:   analysis/PASusageQC.Rmd
    Modified:   analysis/corrbetweenind.Rmd
    Deleted:    code/Upstream10Bases_general.py
    Modified:   code/bed2saf.py
    Deleted:    code/test.txt

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