Last updated: 2021-05-26

Checks: 7 0

Knit directory: mr_mash_test/

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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004305.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004306.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004307.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004309.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004311.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004615.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004758.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004759.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1017559.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1017582.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018113.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018116.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018117.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018866.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018867.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018868.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018868.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018869.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018870.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018870.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018891.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018891.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018892.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018892.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018893.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018893.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018894.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018894.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018895.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018895.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6297709.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6297709.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6297720.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6297720.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6300278.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6300278.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6300959.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6300959.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6312239.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6312239.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6030933.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6030933.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6030949.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6034734.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6035003.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6190207.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6190207.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026567.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026567.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026568.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026568.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026569.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026569.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026570.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026570.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026571.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026572.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026573.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026574.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026575.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027191.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027193.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027194.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027194.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027195.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027196.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027196.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027197.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027197.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027198.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027198.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027239.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027239.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027240.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027240.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027241.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027241.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027242.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027242.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027243.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027243.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027244.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027244.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027245.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027245.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027246.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027246.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027247.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027247.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027248.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027248.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027627.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027627.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027628.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027628.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027629.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027629.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027630.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027630.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027631.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027631.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027632.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027632.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027633.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027633.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027634.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027634.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027635.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027635.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027636.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027636.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027637.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027637.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027638.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027638.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027639.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028254.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028255.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028255.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028256.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028256.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028298.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028298.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028299.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028299.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028300.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028300.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028301.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028301.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028302.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028302.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028303.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028303.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028304.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028304.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028305.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028305.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028306.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028306.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028307.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028307.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021443.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021443.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021444.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021444.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021445.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021445.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021446.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021446.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021447.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021447.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021448.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021448.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021449.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021449.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021450.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021450.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021451.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021451.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021452.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021452.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021754.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021754.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021755.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021755.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021756.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021756.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021757.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021757.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021758.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021758.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021779.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021779.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021780.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021780.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021781.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021781.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021782.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021783.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021783.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022047.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022047.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022048.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022048.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022049.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022049.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022050.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022050.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022051.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022051.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022052.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022052.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022053.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022053.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022054.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022054.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022055.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022055.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022056.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022056.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022357.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022357.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022358.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022358.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022359.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022359.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022360.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022360.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022361.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022361.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022382.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022382.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022383.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022383.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022384.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022384.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022385.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022385.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022386.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022386.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022519.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022519.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022520.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022520.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022521.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022521.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022522.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022522.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022523.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022523.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022524.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022524.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022525.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022525.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022526.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022526.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022527.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022527.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022528.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022528.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022829.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022829.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022830.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022830.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022831.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022831.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022832.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022832.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022833.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022833.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022854.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022854.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022855.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022855.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022856.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022856.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022857.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022857.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022858.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022858.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023508.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023508.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023509.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023509.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023510.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023510.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023511.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023511.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023512.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023512.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007810.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007811.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007812.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007813.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007816.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007817.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007818.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1032335.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1032759.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1032760.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1033689.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036017.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036041.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036042.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036043.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036043.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036044.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036044.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6342504.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6342504.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6342513.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6342513.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6350805.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6350805.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6350813.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6350813.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6355751.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6355751.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_pipeline.6017919.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_pipeline.6017922.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_pipeline.6019026.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_pipeline.6019566.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012643.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012645.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012646.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012647.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012648.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012648.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012649.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012650.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012651.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012652.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012654.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012657.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012657.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012658.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012658.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012659.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012659.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012660.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012660.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012661.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012661.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012662.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012662.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013263.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013263.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013264.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013264.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013265.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013265.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013266.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013266.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013267.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013267.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013268.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013268.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013269.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013269.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013270.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013270.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013271.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013271.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013272.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013272.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013313.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013313.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013314.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013314.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013315.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013315.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013316.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013316.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013317.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013317.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013318.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013318.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013319.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013319.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013320.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013320.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013321.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013321.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013322.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013322.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013746.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013746.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013747.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013747.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013748.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013748.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013749.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013749.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013750.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013750.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013751.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013751.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013752.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013752.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013753.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013753.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013754.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013754.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013755.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013755.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013758.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013758.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013759.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013759.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013760.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013760.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013761.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013761.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013762.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013762.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013763.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013763.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013764.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013764.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013765.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013765.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013766.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013766.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013767.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013767.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014435.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014435.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014436.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014436.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014437.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014438.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014438.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014439.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014439.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014440.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014440.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014441.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014441.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014442.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014442.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014443.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014443.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014486.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014486.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014487.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014487.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014488.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014488.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014489.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014489.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014490.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014490.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014491.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014491.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014492.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014492.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014493.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014493.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014494.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014494.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014495.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014495.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036253.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036253.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036254.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036254.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036255.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036255.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036256.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036256.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036257.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036257.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036259.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036259.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036260.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036260.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036261.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036261.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036262.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036262.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036263.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036263.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039255.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039255.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039256.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039256.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039257.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039257.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039258.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039258.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039259.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039259.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039282.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039282.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039283.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039283.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039284.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039284.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039285.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039285.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039286.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039286.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039464.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039464.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039465.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039465.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039466.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039466.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039467.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039467.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039468.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039468.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039469.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039469.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040619.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040620.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040621.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040622.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040623.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040624.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040625.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040625.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040626.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040626.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040627.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040627.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040628.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040628.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040629.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040629.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041231.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041231.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041232.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041232.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041233.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041233.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041234.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041234.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041235.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041235.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041236.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041236.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041237.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041237.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041238.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041238.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041239.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041239.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041240.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041240.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041264.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041264.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041265.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041265.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041266.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041266.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041267.err
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Untracked files:
    Untracked:  analysis/dense_issue_investigation2/
    Untracked:  code/20200502_Prepare_ED_prior.ipynb
    Untracked:  code/plot_test.R
    Untracked:  code/pred_fullV_LNP1.R
    Untracked:  dsc/mvreg_all_genes_prior_09_11_20_COPY.dsc

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These are the previous versions of the repository in which changes were made to the R Markdown (analysis/mrmash_vs_mtlasso_vs_utmost.Rmd) and HTML (docs/mrmash_vs_mtlasso_vs_utmost.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

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###Set options
options(stringsAsFactors=FALSE)

###Load libraries
library(dscrutils)
library(cowplot)
library(ggplot2)
library(scales)

###Function to convert dscquery output from list to data.frame suitable for plotting
convert_dsc_to_dataframe <- function(dsc){
  ###Data.frame to store the results after convertion
  dsc_df <- data.frame()

  ###Get length of list elements
  n_elem <- length(dsc$DSC)

  ###Loop through the dsc list
  for(i in 1:n_elem){
    ##Prepare vectors making up the final data frame
    r_scalar <- dsc$simulate.r[i]
    repp <- rep(dsc$DSC[i], times=r_scalar)
    n <- rep(dsc$simulate.n[i], times=r_scalar)
    p <- rep(dsc$simulate.p[i], times=r_scalar)
    p_causal <- rep(dsc$simulate.p_causal[i], times=r_scalar)
    r <- rep(dsc$simulate.r[i], times=r_scalar)
    response <- 1:r_scalar
    pve <- rep(dsc$simulate.pve[i], times=r_scalar)
    simulate <- rep(dsc$simulate[i], times=r_scalar)
    fit <- rep(dsc$fit[i], times=r_scalar)
    score <- rep(dsc$score[i], times=r_scalar)
    score.err <- dsc$score.err[[i]]
    timing <- rep(dsc$fit.time[i], times=r_scalar)

    ##Build the data frame
    df <- data.frame(rep=repp, n=n, p=p, p_num_caus=p_causal, r=r, response=response, pve=pve,
                     scenario=simulate, method=fit, score_metric=score, score_value=score.err, time=timing)
    dsc_df <- rbind(dsc_df, df)
  }

  return(dsc_df)
}

colors <- c("skyblue", "limegreen", "red")

In all the analyses so far, we have used Abhishek’s implementation of the sparse multi-task LASSO (called mtlasso here), the method that was used in UTMOST. This is because the original implementation requires the data in an awkward format. Note that Abhishek’s implementation is not exactly the same as UTMOST. For example, the initialization of the coefficients and the way to choose the grid of values for the tuning parameters are different. Recently, the Ritchie Lab reimplemented the method using the original code from the UTMOST autors so that it takes in data in the standard format (i.e., Y in matrix form). The caveat is that this reimplementation does not allow for missing values in Y. In this website, we want to compare mr.mash to both the Ritchie Lab’s implementation and Abhishek’s implementation of UTMOST. Because the original UTMOST method only provides the estimated coefficients and does not provide an estimated intercept, we are going to compare the accuracy of the estimated coefficients for the three methods in simulations with independent predictors.

We simulated five scenarios with n=500, p=1000, r=10, PVE=0.2, p_causal=randomly sampled between 1 and 10, independent residuals, and the following structure of effects across conditions:

  • equal effects.

  • independent effects.

  • effects only in condition 1.

  • equal effects only in condition 1-3.

  • shared effects in condition 1-3, shared effects in condition 7-10 (with per-condition PVE=0.05), and no sharing between these two groups.

mr.mash was fitted with only canonical covariance matrices, updating V (imposing a diagonal structure), and updating the prior weights using EM updates. Because UTMOST only centers the predictors, mtlasso and mr.mash were also run only centering the predictors for consistency.

The accuracy of the estimated coefficients is measured as the mean squared error (MSE) to the true coefficients.

Equal effects across conditions

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost", 
            c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",   
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"), 
                    conditions = "$(simulate) == 'indepX_indepV_sharedB_allr_norm'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))

p <- ggplot(dsc_plots, aes_string(x = "method_fac", y = "score_value", fill = "method_fac")) +
    geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
    scale_fill_manual(values = colors) +
    labs(x = "", y = "MSE", fill="Method") +
    theme_cowplot(font_size = 20) +
    theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank())

print(p)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11
###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11

Independent effects across conditions

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost",
                    c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"),
                    conditions = "$(simulate) == 'indepX_indepV_indepB_allr_norm'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))

p <- ggplot(dsc_plots, aes_string(x = "method_fac", y = "score_value", fill = "method_fac")) +
        geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
        scale_fill_manual(values = colors) +
        labs(x = "", y = "MSE", fill="Method") +
        theme_cowplot(font_size = 20) +
        theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank())

print(p)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11
###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11

Effects only in condition 1

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost",
                    c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"),
                    conditions = "$(simulate) == 'indepX_indepV_B_1causalr'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))
dsc_plots$response_fac <- as.factor(dsc_plots$response)

p <- ggplot(dsc_plots, aes_string(x = "response_fac", y = "score_value", fill = "method_fac")) +
        geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
        scale_fill_manual(values = colors) +
        labs(x = "Condition", y = "MSE", fill="Method") +
        theme_cowplot(font_size = 20)

print(p)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11
###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11

Equal effects in condition 1-3

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost",
                    c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"),
                    conditions = "$(simulate) == 'indepX_indepV_sharedB_3causalrespr10'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))
dsc_plots$response_fac <- as.factor(dsc_plots$response)

p <- ggplot(dsc_plots, aes_string(x = "response_fac", y = "score_value", fill = "method_fac")) +
        geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
        scale_fill_manual(values = colors) +
        labs(x = "Condition", y = "MSE", fill="Method") +
        theme_cowplot(font_size = 20)

print(p)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11
###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11

Shared effects in condition 1-3, shared effects in condition 7-10 (with per-condition PVE=0.05), and no sharing between these two groups

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost",
                    c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"),
                    conditions = "$(simulate) == 'indepX_indepV_sharedB_2blocksr_diffPVE'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))
dsc_plots$response_fac <- as.factor(dsc_plots$response)

p <- ggplot(dsc_plots, aes_string(x = "response_fac", y = "score_value", fill = "method_fac")) +
        geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
        scale_fill_manual(values = colors) +
        labs(x = "Condition", y = "MSE", fill="Method") +
        theme_cowplot(font_size = 20)

print(p)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11
###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Version Author Date
2dcb898 Fabio Morgante 2021-05-11

The results show that mr.mash estimates the coefficients better than both implementations of the sparse multi-task LASSO and is much faster. Abhishek’s implementation produces results that agree with UTMOST in most scenatios, but seems slower (especially since the grid for the tuning parameters has length = 10 while it has length = 100 in UTMOST). That makes sense since the coordinate updates are implemented in C++ in UTMOST.


sessionInfo()
R version 4.0.3 (2020-10-10)
Platform: x86_64-conda-linux-gnu (64-bit)
Running under: CentOS Linux 8 (Core)

Matrix products: default
BLAS/LAPACK: /scratch/midway3/fmorgante/miniconda3/envs/py38dsc/lib/libopenblasp-r0.3.12.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] scales_1.1.1      ggplot2_3.3.3     cowplot_1.1.1     dscrutils_0.4.3.5

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.6        highr_0.8         pillar_1.6.0      compiler_4.0.3   
 [5] later_1.1.0.1     git2r_0.28.0      workflowr_1.6.2   prettyunits_1.1.1
 [9] tools_4.0.3       progress_1.2.2    digest_0.6.27     jsonlite_1.7.2   
[13] lattice_0.20-41   gtable_0.3.0      evaluate_0.14     lifecycle_1.0.0  
[17] tibble_3.1.0      pkgconfig_2.0.3   rlang_0.4.10      Matrix_1.3-2     
[21] yaml_2.2.1        xfun_0.22         withr_2.4.1       dplyr_1.0.5      
[25] stringr_1.4.0     knitr_1.32        rappdirs_0.3.3    generics_0.1.0   
[29] fs_1.5.0          vctrs_0.3.7       hms_1.0.0         tidyselect_1.1.0 
[33] rprojroot_2.0.2   grid_4.0.3        reticulate_1.18   glue_1.4.2       
[37] data.table_1.14.0 R6_2.5.0          fansi_0.4.2       rmarkdown_2.7    
[41] farver_2.1.0      purrr_0.3.4       magrittr_2.0.1    whisker_0.4      
[45] promises_1.2.0.1  ellipsis_0.3.1    htmltools_0.5.1.1 colorspace_2.0-0 
[49] httpuv_1.5.5      labeling_0.4.2    utf8_1.2.1        stringi_1.5.3    
[53] munsell_0.5.0     crayon_1.4.1