mr.mash vs mtlasso vs UTMOST

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Last updated: 2021-05-26

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Knit directory: mr_mash_test/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

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R Markdown file: up-to-date

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Environment: empty

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Seed: set.seed(20200328)

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Session information: recorded

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Cache: none

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File paths: relative

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Repository version: 1e45cb7

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The results in this page were generated with repository version 1e45cb7. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:

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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004305.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004306.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004308.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_missing_Y_pipeline_array.1004759.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1017559.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1017560.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1017560.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1017582.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1017583.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1017584.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018109.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018110.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018111.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018113.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018114.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018115.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018116.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018117.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018117.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018866.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018866.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018867.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018867.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018868.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018868.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018869.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018869.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018870.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018870.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018891.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018891.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018892.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018892.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018893.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018893.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018894.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018894.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018895.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sB_1causalrespr10_indepReps_pipeline_array.1018895.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6297709.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6297709.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6297720.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6297720.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6300278.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6300278.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6300959.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6300959.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6312239.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_lowPVE_pipeline.6312239.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6030933.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6030933.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6030949.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6030949.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6034734.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6034734.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6035003.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6035003.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6190207.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_B_1causalrespr10_pipeline.6190207.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026567.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026567.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026568.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026568.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026569.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026569.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026570.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026570.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026571.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026571.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026572.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026572.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026573.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026573.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026574.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026574.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1026575.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027191.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027193.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027194.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027194.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027195.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027196.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027196.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027197.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027197.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027198.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027198.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027239.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027239.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027240.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027240.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027241.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027241.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027242.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027242.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027243.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027243.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027244.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027244.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027245.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027245.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027246.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027246.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027247.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027247.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027248.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027248.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027627.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027627.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027628.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027628.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027629.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027629.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027630.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027630.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027631.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027631.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027632.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027632.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027633.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027633.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027634.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027634.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027635.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027635.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027636.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027636.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027637.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027637.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027638.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027638.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1027639.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028254.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028255.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028255.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028256.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028256.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028298.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028298.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028299.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028299.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028300.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028300.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028301.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028301.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028302.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028302.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028303.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028303.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028304.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028304.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028305.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028305.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028306.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028306.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028307.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_missing_Y_pipeline_array.1028307.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021443.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021443.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021444.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021444.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021445.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021445.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021446.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021446.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021447.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021447.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021448.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021448.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021449.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021449.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021450.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021450.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021451.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021451.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021452.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021452.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021754.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021754.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021755.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021755.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021756.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021756.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021757.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021757.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021758.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021758.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021779.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021779.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021780.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021780.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021781.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021781.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021782.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021783.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1021783.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022047.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022047.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022048.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022048.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022049.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022049.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022050.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022050.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022051.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022051.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022052.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022052.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022053.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022053.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022054.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022054.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022055.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022055.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022056.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022056.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022357.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022357.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022358.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022358.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022359.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022359.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022360.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022360.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022361.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022361.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022382.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022382.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022383.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022383.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022384.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022384.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022385.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022385.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022386.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022386.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022519.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022519.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022520.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022520.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022521.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022521.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022522.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022522.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022523.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022523.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022524.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022524.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022525.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022525.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022526.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022526.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022527.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022527.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022528.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022528.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022829.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022829.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022830.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022830.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022831.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022831.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022832.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022832.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022833.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022833.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022854.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022854.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022855.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022855.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022856.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022856.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022857.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022857.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022858.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1022858.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023508.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023508.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023509.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023509.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023510.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023510.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023511.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023511.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023512.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_indepB_r10_indepReps_pipeline_array.1023512.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007810.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007811.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007812.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007813.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007816.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007817.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_2blocksr10_diffPVE_indepReps_missing_Y_pipeline_array.1007818.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1032335.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1032759.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1032760.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1033689.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036017.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036041.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036042.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036043.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036043.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036044.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_indepReps_pipeline_array.1036044.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6342504.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6342504.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6342513.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6342513.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6350805.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6350805.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6350813.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6350813.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6355751.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_lowPVE_pipeline.6355751.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_pipeline.6017919.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_pipeline.6017922.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_pipeline.6019026.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_3causalrespr10_pipeline.6019566.err
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012643.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012645.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012646.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012647.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012648.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012648.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012649.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012650.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012651.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012652.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012654.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012657.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012657.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012658.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012658.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012659.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012659.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012660.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012660.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012661.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012661.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012662.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1012662.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013263.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013263.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013264.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013264.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013265.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013265.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013266.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013266.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013267.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013267.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013268.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013268.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013269.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013269.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013270.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013270.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013271.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013271.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013272.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013272.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013313.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013313.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013314.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013314.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013315.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013315.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013316.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013316.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013317.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013317.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013318.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013318.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013319.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013319.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013320.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013320.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013321.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013321.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013322.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013322.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013746.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013746.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013747.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013747.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013748.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013748.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013749.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013749.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013750.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013750.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013751.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013751.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013752.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013752.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013753.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013753.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013754.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013754.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013755.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013755.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013758.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013758.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013759.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013759.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013760.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013760.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013761.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013761.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013762.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013762.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013763.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013763.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013764.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013764.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013765.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013765.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013766.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013766.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013767.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1013767.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014435.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014435.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014436.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014436.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014437.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014438.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014438.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014439.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014439.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014440.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014440.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014441.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014441.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014442.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014442.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014443.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014443.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014486.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014486.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014487.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014487.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014488.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014488.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014489.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014489.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014490.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014490.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014491.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014491.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014492.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014492.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014493.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014493.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014494.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014494.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014495.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_missing_Y_pipeline_array.1014495.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036253.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036253.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036254.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036254.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036255.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036255.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036256.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036256.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036257.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036257.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036259.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036259.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036260.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036260.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036261.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036261.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036262.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036262.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036263.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1036263.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039255.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039255.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039256.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039256.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039257.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039257.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039258.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039258.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039259.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039259.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039282.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039282.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039283.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039283.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039284.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039284.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039285.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039285.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039286.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039286.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039464.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039464.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039465.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039465.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039466.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039466.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039467.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039467.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039468.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039468.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039469.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1039469.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040619.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040620.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040621.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040622.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040623.out
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    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040624.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040625.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040625.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040626.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040626.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040627.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040627.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040628.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040628.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040629.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1040629.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041231.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041231.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041232.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041232.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041233.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041233.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041234.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041234.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041235.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041235.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041236.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041236.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041237.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041237.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041238.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041238.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041239.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041239.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041240.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041240.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041264.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041264.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041265.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041265.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041266.err
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041266.out
    Ignored:    scripts/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array/mvreg_all_genes_prior_GTExrealX_indepV_sharedB_r10_indepReps_pipeline_array.1041267.err
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Untracked files:
    Untracked:  analysis/dense_issue_investigation2/
    Untracked:  code/20200502_Prepare_ED_prior.ipynb
    Untracked:  code/plot_test.R
    Untracked:  code/pred_fullV_LNP1.R
    Untracked:  dsc/mvreg_all_genes_prior_09_11_20_COPY.dsc

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---

These are the previous versions of the repository in which changes were made to the R Markdown (analysis/mrmash_vs_mtlasso_vs_utmost.Rmd) and HTML (docs/mrmash_vs_mtlasso_vs_utmost.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File	Version	Author	Date	Message
html	fd715fa	Fabio Morgante	2021-05-11	Build site.
Rmd	038e1a6	Fabio Morgante	2021-05-11	Minor improvements
html	609b193	Fabio Morgante	2021-05-11	Build site.
Rmd	962ece6	Fabio Morgante	2021-05-11	Add toc depth
html	302d541	Fabio Morgante	2021-05-11	Build site.
Rmd	73a3979	Fabio Morgante	2021-05-11	Add a few improvements and descriptions
html	2dcb898	Fabio Morgante	2021-05-11	Build site.
Rmd	9e3b05f	Fabio Morgante	2021-05-11	Add mr.mash vs smtlasso vs utmost

---

###Set options
options(stringsAsFactors=FALSE)

###Load libraries
library(dscrutils)
library(cowplot)
library(ggplot2)
library(scales)

###Function to convert dscquery output from list to data.frame suitable for plotting
convert_dsc_to_dataframe <- function(dsc){
  ###Data.frame to store the results after convertion
  dsc_df <- data.frame()

  ###Get length of list elements
  n_elem <- length(dsc$DSC)

  ###Loop through the dsc list
  for(i in 1:n_elem){
    ##Prepare vectors making up the final data frame
    r_scalar <- dsc$simulate.r[i]
    repp <- rep(dsc$DSC[i], times=r_scalar)
    n <- rep(dsc$simulate.n[i], times=r_scalar)
    p <- rep(dsc$simulate.p[i], times=r_scalar)
    p_causal <- rep(dsc$simulate.p_causal[i], times=r_scalar)
    r <- rep(dsc$simulate.r[i], times=r_scalar)
    response <- 1:r_scalar
    pve <- rep(dsc$simulate.pve[i], times=r_scalar)
    simulate <- rep(dsc$simulate[i], times=r_scalar)
    fit <- rep(dsc$fit[i], times=r_scalar)
    score <- rep(dsc$score[i], times=r_scalar)
    score.err <- dsc$score.err[[i]]
    timing <- rep(dsc$fit.time[i], times=r_scalar)

    ##Build the data frame
    df <- data.frame(rep=repp, n=n, p=p, p_num_caus=p_causal, r=r, response=response, pve=pve,
                     scenario=simulate, method=fit, score_metric=score, score_value=score.err, time=timing)
    dsc_df <- rbind(dsc_df, df)
  }

  return(dsc_df)
}

colors <- c("skyblue", "limegreen", "red")

In all the analyses so far, we have used Abhishek’s implementation of the sparse multi-task LASSO (called mtlasso here), the method that was used in UTMOST. This is because the original implementation requires the data in an awkward format. Note that Abhishek’s implementation is not exactly the same as UTMOST. For example, the initialization of the coefficients and the way to choose the grid of values for the tuning parameters are different. Recently, the Ritchie Lab reimplemented the method using the original code from the UTMOST autors so that it takes in data in the standard format (i.e., Y in matrix form). The caveat is that this reimplementation does not allow for missing values in Y. In this website, we want to compare mr.mash to both the Ritchie Lab’s implementation and Abhishek’s implementation of UTMOST. Because the original UTMOST method only provides the estimated coefficients and does not provide an estimated intercept, we are going to compare the accuracy of the estimated coefficients for the three methods in simulations with independent predictors.

We simulated five scenarios with n=500, p=1000, r=10, PVE=0.2, p_causal=randomly sampled between 1 and 10, independent residuals, and the following structure of effects across conditions:

• equal effects.

• independent effects.

• effects only in condition 1.

• equal effects only in condition 1-3.

• shared effects in condition 1-3, shared effects in condition 7-10 (with per-condition PVE=0.05), and no sharing between these two groups.

mr.mash was fitted with only canonical covariance matrices, updating V (imposing a diagonal structure), and updating the prior weights using EM updates. Because UTMOST only centers the predictors, mtlasso and mr.mash were also run only centering the predictors for consistency.

The accuracy of the estimated coefficients is measured as the mean squared error (MSE) to the true coefficients.

Equal effects across conditions

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost", 
            c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",   
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"), 
                    conditions = "$(simulate) == 'indepX_indepV_sharedB_allr_norm'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))

p <- ggplot(dsc_plots, aes_string(x = "method_fac", y = "score_value", fill = "method_fac")) +
    geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
    scale_fill_manual(values = colors) +
    labs(x = "", y = "MSE", fill="Method") +
    theme_cowplot(font_size = 20) +
    theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank())

print(p)

Past versions of "equal effects simulations-1.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Past versions of "equal effects simulations-2.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

Independent effects across conditions

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost",
                    c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"),
                    conditions = "$(simulate) == 'indepX_indepV_indepB_allr_norm'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))

p <- ggplot(dsc_plots, aes_string(x = "method_fac", y = "score_value", fill = "method_fac")) +
        geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
        scale_fill_manual(values = colors) +
        labs(x = "", y = "MSE", fill="Method") +
        theme_cowplot(font_size = 20) +
        theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank())

print(p)

Past versions of "independent effects simulations-1.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Past versions of "independent effects simulations-2.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

Effects only in condition 1

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost",
                    c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"),
                    conditions = "$(simulate) == 'indepX_indepV_B_1causalr'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))
dsc_plots$response_fac <- as.factor(dsc_plots$response)

p <- ggplot(dsc_plots, aes_string(x = "response_fac", y = "score_value", fill = "method_fac")) +
        geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
        scale_fill_manual(values = colors) +
        labs(x = "Condition", y = "MSE", fill="Method") +
        theme_cowplot(font_size = 20)

print(p)

Past versions of "singleton effects simulations-1.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Past versions of "singleton effects simulations-2.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

Equal effects in condition 1-3

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost",
                    c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"),
                    conditions = "$(simulate) == 'indepX_indepV_sharedB_3causalrespr10'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))
dsc_plots$response_fac <- as.factor(dsc_plots$response)

p <- ggplot(dsc_plots, aes_string(x = "response_fac", y = "score_value", fill = "method_fac")) +
        geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
        scale_fill_manual(values = colors) +
        labs(x = "Condition", y = "MSE", fill="Method") +
        theme_cowplot(font_size = 20)

print(p)

Past versions of "one block effects simulations-1.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Past versions of "one block effects simulations-2.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

Shared effects in condition 1-3, shared effects in condition 7-10 (with per-condition PVE=0.05), and no sharing between these two groups

dsc_out <- dscquery("output/mvreg_mrmash_vs_mtlasso_vs_utmost",
                    c("simulate.n", "simulate.p", "simulate.p_causal", "simulate.r",
                      "simulate.pve", "simulate.B_cor", "simulate.B_scale",
                      "simulate.X_cor", "simulate.X_scale",
                      "simulate.V_cor", "simulate.prop_testset",
                      "simulate", "fit", "score", "score.err", "fit.time"),
                    conditions = "$(simulate) == 'indepX_indepV_sharedB_2blocksr_diffPVE'", verbose=FALSE)

dsc_plots <- convert_dsc_to_dataframe(dsc_out)

dsc_plots$method_fac <- factor(dsc_plots$method, levels=c("mr_mash", "mtlasso", "utmost"))
dsc_plots$response_fac <- as.factor(dsc_plots$response)

p <- ggplot(dsc_plots, aes_string(x = "response_fac", y = "score_value", fill = "method_fac")) +
        geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
        scale_fill_manual(values = colors) +
        labs(x = "Condition", y = "MSE", fill="Method") +
        theme_cowplot(font_size = 20)

print(p)

Past versions of "two blocks effects simulations-1.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

###Create plot for run time
dsc_plots_time <- dsc_plots[which(dsc_plots$response==1),
                            -which(colnames(dsc_plots) %in% c("score_metric", "score_value", "response"))]

p_time <- ggplot(dsc_plots_time, aes_string(x = "method", y = "time", fill = "method")) +
  geom_boxplot(color = "black", outlier.size = 1, width = 0.85) +
  scale_fill_manual(values = colors) +
  scale_y_continuous(trans="log2", breaks = trans_breaks("log2", function(x) 2^x),
                     labels = trans_format("log2", math_format(2^.x))) +
  labs(x = "", y = "Elapsed time (seconds) in log2 scale", title = "Run time", fill="Method") +
  theme_cowplot(font_size = 20) +
  theme(axis.line.x = element_blank(), axis.text.x = element_blank(), axis.ticks.x = element_blank(),
        plot.title = element_text(hjust = 0.5))

print(p_time)

Past versions of "two blocks effects simulations-2.png"

Version	Author	Date
2dcb898	Fabio Morgante	2021-05-11

The results show that mr.mash estimates the coefficients better than both implementations of the sparse multi-task LASSO and is much faster. Abhishek’s implementation produces results that agree with UTMOST in most scenatios, but seems slower (especially since the grid for the tuning parameters has length = 10 while it has length = 100 in UTMOST). That makes sense since the coordinate updates are implemented in C++ in UTMOST.

Session information

sessionInfo()

R version 4.0.3 (2020-10-10)
Platform: x86_64-conda-linux-gnu (64-bit)
Running under: CentOS Linux 8 (Core)

Matrix products: default
BLAS/LAPACK: /scratch/midway3/fmorgante/miniconda3/envs/py38dsc/lib/libopenblasp-r0.3.12.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] scales_1.1.1      ggplot2_3.3.3     cowplot_1.1.1     dscrutils_0.4.3.5

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.6        highr_0.8         pillar_1.6.0      compiler_4.0.3   
 [5] later_1.1.0.1     git2r_0.28.0      workflowr_1.6.2   prettyunits_1.1.1
 [9] tools_4.0.3       progress_1.2.2    digest_0.6.27     jsonlite_1.7.2   
[13] lattice_0.20-41   gtable_0.3.0      evaluate_0.14     lifecycle_1.0.0  
[17] tibble_3.1.0      pkgconfig_2.0.3   rlang_0.4.10      Matrix_1.3-2     
[21] yaml_2.2.1        xfun_0.22         withr_2.4.1       dplyr_1.0.5      
[25] stringr_1.4.0     knitr_1.32        rappdirs_0.3.3    generics_0.1.0   
[29] fs_1.5.0          vctrs_0.3.7       hms_1.0.0         tidyselect_1.1.0 
[33] rprojroot_2.0.2   grid_4.0.3        reticulate_1.18   glue_1.4.2       
[37] data.table_1.14.0 R6_2.5.0          fansi_0.4.2       rmarkdown_2.7    
[41] farver_2.1.0      purrr_0.3.4       magrittr_2.0.1    whisker_0.4      
[45] promises_1.2.0.1  ellipsis_0.3.1    htmltools_0.5.1.1 colorspace_2.0-0 
[49] httpuv_1.5.5      labeling_0.4.2    utf8_1.2.1        stringi_1.5.3    
[53] munsell_0.5.0     crayon_1.4.1