Last updated: 2020-05-25
Checks: 2 0
Knit directory: analysis_pipelines/
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Untracked: analysis/TWAS.Rmd
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Untracked: analysis/make_ldsc_continuous_annot.R
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | 4be4f67 | kevinlkx | 2020-05-25 | wflow_publish(“analysis/GWAS_sumstats.Rmd”) |
| html | d5cee1f | kevinlkx | 2020-05-24 | Build site. |
| html | 5a00125 | kevinlkx | 2020-05-24 | Build site. |
| Rmd | c4cd35c | kevinlkx | 2020-05-24 | wflow_publish(“analysis/GWAS_sumstats.Rmd”) |
| html | 83ec764 | kevinlkx | 2020-05-24 | Build site. |
| html | 5641158 | kevinlkx | 2020-05-24 | Build site. |
| Rmd | c9c19d4 | kevinlkx | 2020-05-24 | wflow_publish(“analysis/GWAS_sumstats.Rmd”) |
| html | 777c38c | kevinlkx | 2020-05-24 | Build site. |
| Rmd | c721074 | kevinlkx | 2020-05-24 | wflow_publish(“analysis/GWAS_sumstats.Rmd”) |
| html | 8f14331 | kevinlkx | 2020-05-24 | Build site. |
| Rmd | d861aa6 | kevinlkx | 2020-05-24 | wflow_publish(“analysis/GWAS_sumstats.Rmd”) |
.sumstats format using munge_sumstats.py, see ldsc wiki “Summary-Statistics-File-Format”.sumstats format on RCCSome of the processed GWAS summary stats (mostly from Jean’s GWAS collection) can be found on RCC: /project2/xinhe/kevinluo/GWAS/GWAS_summary_stats/GWAS_collection/ldsc_format/
/project2/xinhe/kevinluo/GWAS/GWAS_summary_stats/GWAS_summary_alkesgroup/independent_sumstats//project2/xinhe/kevinluo/GWAS/GWAS_summary_stats/GWAS_summary_alkesgroup/sumstats_formatted/