Last updated: 2023-07-28

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Knit directory: Cardiotoxicity/

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Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the repository in which changes were made to the R Markdown (analysis/Figure8.Rmd) and HTML (docs/Figure8.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
Rmd 974fcde reneeisnowhere 2023-07-28 new figures update
html c40aced reneeisnowhere 2023-07-26 Build site.
Rmd 58c7965 reneeisnowhere 2023-07-26 updating figures
Rmd f88c9e4 reneeisnowhere 2023-07-18 adding in ld50 for average
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Rmd 8549513 reneeisnowhere 2023-07-10 updated names and color sets
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Rmd 63d054a reneeisnowhere 2023-07-07 Various changes to graphs. pending Monday-renames
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Rmd e1bb084 reneeisnowhere 2023-07-06 updated figures
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Rmd 37978a9 reneeisnowhere 2023-07-04 updates of 3 letter abbrv
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Figure 8

Dox respose eQTLS are enriched in ACi response genes

A. 24 hour DEG enrichment in GTEx genes

B. 24 hour DEG enrichment in reQTLs

C. DOXreQTLS strongly overlap other AC drugs

D.


R version 4.3.1 (2023-06-16 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19045)

Matrix products: default


locale:
[1] LC_COLLATE=English_United States.utf8 
[2] LC_CTYPE=English_United States.utf8   
[3] LC_MONETARY=English_United States.utf8
[4] LC_NUMERIC=C                          
[5] LC_TIME=English_United States.utf8    

time zone: America/Chicago
tzcode source: internal

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] paletteer_1.5.0     ggVennDiagram_1.2.2 broom_1.0.5        
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 [7] data.table_1.14.8   BiocGenerics_0.46.0 lubridate_1.9.2    
[10] forcats_1.0.0       stringr_1.5.0       dplyr_1.1.2        
[13] purrr_1.0.1         readr_2.1.4         tidyr_1.3.0        
[16] tibble_3.2.1        ggplot2_3.4.2       tidyverse_2.0.0    
[19] workflowr_1.7.0    

loaded via a namespace (and not attached):
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[13] pkgconfig_2.0.3   lifecycle_1.0.3   farver_2.1.1      compiler_4.3.1   
[17] git2r_0.32.0      textshaping_0.3.6 munsell_0.5.0     getPass_0.2-2    
[21] httpuv_1.6.11     htmltools_0.5.5   sass_0.4.7        yaml_2.3.7       
[25] later_1.3.1       pillar_1.9.0      jquerylib_0.1.4   whisker_0.4.1    
[29] cachem_1.0.8      tidyselect_1.2.0  digest_0.6.33     stringi_1.7.12   
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[37] grid_4.3.1        colorspace_2.1-0  cli_3.6.1         magrittr_2.0.3   
[41] utf8_1.2.3        withr_2.5.0       RVenn_1.1.0       scales_1.2.1     
[45] promises_1.2.0.1  backports_1.4.1   timechange_0.2.0  rmarkdown_2.23   
[49] httr_1.4.6        ragg_1.2.5        hms_1.1.3         evaluate_0.21    
[53] knitr_1.43        rlang_1.1.1       Rcpp_1.0.11       glue_1.6.2       
[57] rstudioapi_0.15.0 jsonlite_1.8.7    R6_2.5.1          systemfonts_1.0.4
[61] fs_1.6.3