Last updated: 2022-03-01

Checks: 1 1

Knit directory: cTWAS_analysis/

This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: uncommitted changes

The R Markdown is untracked by Git. To know which version of the R Markdown file created these results, you’ll want to first commit it to the Git repo. If you’re still working on the analysis, you can ignore this warning. When you’re finished, you can run wflow_publish to commit the R Markdown file and build the HTML.

Repository version: 8ba9d7d

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version 8ba9d7d. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

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Ignored files:
    Ignored:    .ipynb_checkpoints/
    Ignored:    data/AF/

Untracked files:
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    Untracked:  analysis/Autism_Brain_Nucleus_accumbens_basal_ganglia.Rmd
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    Untracked:  analysis/Autism_Brain_Spinal_cord_cervical_c-1.Rmd
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    Untracked:  analysis/Splicing_Test.Rmd
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    Untracked:  code/.ipynb_checkpoints/
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    Untracked:  code/run_BMI_ctwas_rss_LDR_S.R
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    Untracked:  code/run_Glucose_analysis.sh
    Untracked:  code/run_Glucose_ctwas_rss_LDR.R
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    Untracked:  code/run_SCZ_ctwas_rss_LDR.R
    Untracked:  code/run_SCZ_ctwas_rss_LDR_S.R
    Untracked:  code/run_T2D_analysis.sbatch
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Unstaged changes:
    Modified:   analysis/index.Rmd

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

There are no past versions. Publish this analysis with wflow_publish() to start tracking its development.

Autism - Brain Cortex link.

Autism - Brain Spinal cord cervical c-1 link.

Autism - Brain Substantia nigra link.

Autism - Brain Putamen basal ganglia link.

Autism - Brain Nucleus accumbens basal ganglia link.

Autism - Brain Hypothalamus link.

Autism - Brain Hippocampus link.

Autism - Brain Frontal Cortex BA9 link.

Autism - Brain Cerebellum link.

Autism - Brain Cerebellar Hemisphere link.

Autism - Brain Caudate basal ganglia link.

Autism - Brain Anterior cingulate cortex BA24 link.

Autism - Brain Amygdala link.