Last updated: 2019-12-03

Checks: 7 0

Knit directory: rss-peca/

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File Version Author Date Message
html bad6f44 xiangzhu 2019-12-03 Build site.
html 8ef1911 xiangzhu 2019-12-03 Build site.
html ac73230 xiangzhu 2019-11-30 Build site.
Rmd 847666b xiangzhu 2019-11-30 wflow_publish(“analysis/af2017_xref.Rmd”)

Table legends

TODO: explain commonly shared columns

PharmGKB

TODO: explain PharmGKB-specific columns

TTD

TODO: explain TTD-specific columns

DGIdb

TODO: explain DGIdb-specific columns

MGI

TODO: explain MGI-specific columns

OMIM

TODO: explain OMIM-specific columns


─ Session info ───────────────────────────────────────────────────────────────
 setting  value                       
 version  R version 3.6.1 (2019-07-05)
 os       Ubuntu 18.04.3 LTS          
 system   x86_64, linux-gnu           
 ui       X11                         
 language (EN)                        
 collate  en_US.UTF-8                 
 ctype    en_US.UTF-8                 
 tz       America/Los_Angeles         
 date     2019-12-03                  

─ Packages ───────────────────────────────────────────────────────────────────
 package     * version date       lib source        
 assertthat    0.2.1   2019-03-21 [1] CRAN (R 3.6.0)
 backports     1.1.5   2019-10-02 [1] CRAN (R 3.6.1)
 callr         3.3.2   2019-09-22 [1] CRAN (R 3.6.1)
 cli           1.1.0   2019-03-19 [1] CRAN (R 3.6.0)
 crayon        1.3.4   2017-09-16 [1] CRAN (R 3.6.0)
 crosstalk     1.0.0   2016-12-21 [1] CRAN (R 3.6.0)
 data.table  * 1.12.6  2019-10-18 [1] CRAN (R 3.6.1)
 desc          1.2.0   2018-05-01 [1] CRAN (R 3.6.0)
 devtools      2.2.1   2019-09-24 [1] CRAN (R 3.6.1)
 digest        0.6.23  2019-11-23 [1] CRAN (R 3.6.1)
 dplyr       * 0.8.3   2019-07-04 [1] CRAN (R 3.6.1)
 DT          * 0.10    2019-11-12 [1] CRAN (R 3.6.1)
 ellipsis      0.3.0   2019-09-20 [1] CRAN (R 3.6.1)
 evaluate      0.14    2019-05-28 [1] CRAN (R 3.6.0)
 fastmap       1.0.1   2019-10-08 [1] CRAN (R 3.6.1)
 fs            1.3.1   2019-05-06 [1] CRAN (R 3.6.0)
 git2r         0.26.1  2019-06-29 [1] CRAN (R 3.6.0)
 glue          1.3.1   2019-03-12 [1] CRAN (R 3.6.0)
 htmltools     0.4.0   2019-10-04 [1] CRAN (R 3.6.1)
 htmlwidgets   1.5.1   2019-10-08 [1] CRAN (R 3.6.1)
 httpuv        1.5.2   2019-09-11 [1] CRAN (R 3.6.1)
 jsonlite      1.6     2018-12-07 [1] CRAN (R 3.6.0)
 knitr         1.26    2019-11-12 [1] CRAN (R 3.6.1)
 later         1.0.0   2019-10-04 [1] CRAN (R 3.6.1)
 lifecycle     0.1.0   2019-08-01 [1] CRAN (R 3.6.1)
 magrittr      1.5     2014-11-22 [1] CRAN (R 3.6.0)
 memoise       1.1.0   2017-04-21 [1] CRAN (R 3.6.0)
 mime          0.7     2019-06-11 [1] CRAN (R 3.6.0)
 pillar        1.4.2   2019-06-29 [1] CRAN (R 3.6.0)
 pkgbuild      1.0.6   2019-10-09 [1] CRAN (R 3.6.1)
 pkgconfig     2.0.3   2019-09-22 [1] CRAN (R 3.6.1)
 pkgload       1.0.2   2018-10-29 [1] CRAN (R 3.6.0)
 prettyunits   1.0.2   2015-07-13 [1] CRAN (R 3.6.0)
 processx      3.4.1   2019-07-18 [1] CRAN (R 3.6.1)
 promises      1.1.0   2019-10-04 [1] CRAN (R 3.6.1)
 ps            1.3.0   2018-12-21 [1] CRAN (R 3.6.0)
 purrr         0.3.3   2019-10-18 [1] CRAN (R 3.6.1)
 R6            2.4.1   2019-11-12 [1] CRAN (R 3.6.1)
 Rcpp          1.0.3   2019-11-08 [1] CRAN (R 3.6.1)
 remotes       2.1.0   2019-06-24 [1] CRAN (R 3.6.0)
 rlang         0.4.2   2019-11-23 [1] CRAN (R 3.6.1)
 rmarkdown     1.18    2019-11-27 [1] CRAN (R 3.6.1)
 rprojroot     1.3-2   2018-01-03 [1] CRAN (R 3.6.0)
 sessioninfo   1.1.1   2018-11-05 [1] CRAN (R 3.6.0)
 shiny         1.4.0   2019-10-10 [1] CRAN (R 3.6.1)
 stringi       1.4.3   2019-03-12 [1] CRAN (R 3.6.0)
 stringr       1.4.0   2019-02-10 [1] CRAN (R 3.6.0)
 testthat      2.3.0   2019-11-05 [1] CRAN (R 3.6.1)
 tibble        2.1.3   2019-06-06 [1] CRAN (R 3.6.0)
 tidyr       * 1.0.0   2019-09-11 [1] CRAN (R 3.6.1)
 tidyselect    0.2.5   2018-10-11 [1] CRAN (R 3.6.0)
 usethis       1.5.1   2019-07-04 [1] CRAN (R 3.6.1)
 vctrs         0.2.0   2019-07-05 [1] CRAN (R 3.6.1)
 whisker       0.4     2019-08-28 [1] CRAN (R 3.6.1)
 withr         2.1.2   2018-03-15 [1] CRAN (R 3.6.0)
 workflowr     1.5.0   2019-11-01 [1] CRAN (R 3.6.1)
 xfun          0.11    2019-11-12 [1] CRAN (R 3.6.1)
 xtable        1.8-4   2019-04-21 [1] CRAN (R 3.6.0)
 yaml          2.2.0   2018-07-25 [1] CRAN (R 3.6.0)
 zeallot       0.1.0   2018-01-28 [1] CRAN (R 3.6.0)

[1] /home/maimaizhu/R/x86_64-pc-linux-gnu-library/3.6
[2] /usr/local/lib/R/site-library
[3] /usr/lib/R/site-library
[4] /usr/lib/R/library