Last updated: 2018-12-14
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File | Version | Author | Date | Message |
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Rmd | d5d64e9 | Lambda Moses | 2018-12-14 | Added installation instruction |
html | f5616a8 | Lambda Moses | 2018-12-14 | Build site. |
Rmd | 0dc76a9 | Lambda Moses | 2018-12-14 | Changed to new url |
html | 540134b | Lambda Moses | 2018-12-14 | Build site. |
Rmd | e40da79 | Lambda Moses | 2018-12-14 | Changed URL as this repo is transferred to BUStools |
html | fff442d | Lambda Moses | 2018-12-14 | Build site. |
Rmd | 695e202 | Lambda Moses | 2018-12-14 | Changed name to BUSpaRse |
html | 9209390 | Lambda Moses | 2018-12-14 | Update website |
Rmd | 37238e5 | Lambda Moses | 2018-12-14 | Link to this GitHub repo on the website |
html | 2da3b35 | Lambda Moses | 2018-12-14 | Build site. |
Rmd | 55164fb | Lambda Moses | 2018-12-14 | Start workflowr project. |
This repository has example notebooks that demonstrate how to go from fastq files to sparse matrices for scRNA-seq data from start to end. To run the notebooks, please install kallisto, bustools, and the BUSpaRse R package.
You can install BUSpaRse with:
if (!require(devtools)) install.packages("devtools")
devtools::install_github("BUStools/BUSpaRse")
This is work in progress. I’m trying to get this package to Bioconductor.
If you have problems with the notebooks, or have questions about them, please go to the GitHub repo of this website.
This reproducible R Markdown analysis was created with workflowr 1.1.1