Last updated: 2018-12-14
workflowr checks: (Click a bullet for more information) ✔ R Markdown file: up-to-date
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✔ Repository version: 1fc3e91
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Ignored files:
Ignored: .Rhistory
Ignored: .Rproj.user/
Ignored: data/fastqs/
Ignored: data/hgmm_1k_fastqs.tar
Ignored: data/hs_cdna.fa.gz
Ignored: data/mm_cdna.fa.gz
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Ignored: output/out_hgmm1k/
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Untracked: docs/figure/
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File | Version | Author | Date | Message |
---|---|---|---|---|
Rmd | 55164fb | Lambda Moses | 2018-12-14 | Start workflowr project. |
This repository has example notebooks that demonstrate how to go from fastq files to sparse matrices for scRNA-seq data from start to end. To run the notebooks, please install kallisto, bustools, and the BUStoolsR R package.
This reproducible R Markdown analysis was created with workflowr 1.1.1