Last updated: 2024-12-26
Checks: 1 1
Knit directory: analysis-user-group/
This reproducible R Markdown analysis was created with workflowr (version 1.7.1). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.
The R Markdown file has unstaged changes. To know which version of
the R Markdown file created these results, you’ll want to first commit
it to the Git repo. If you’re still working on the analysis, you can
ignore this warning. When you’re finished, you can run
wflow_publish
to commit the R Markdown file and build the
HTML.
Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.
The results in this page were generated with repository version b381b5b. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.
Note that you need to be careful to ensure that all relevant files for
the analysis have been committed to Git prior to generating the results
(you can use wflow_publish
or
wflow_git_commit
). workflowr only checks the R Markdown
file, but you know if there are other scripts or data files that it
depends on. Below is the status of the Git repository when the results
were generated:
Ignored files:
Ignored: .DS_Store
Ignored: analysis/.DS_Store
Untracked files:
Untracked: analysis/0_announcements.Rmd
Untracked: analysis/0_license.Rmd
Untracked: analysis/0_start.Rmd
Untracked: analysis/adit/
Untracked: workflow.R
Unstaged changes:
Modified: _workflowr.yml
Modified: analysis/_site.yml
Deleted: analysis/about.Rmd
Modified: analysis/index.Rmd
Deleted: analysis/license.Rmd
Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.
These are the previous versions of the repository in which changes were
made to the R Markdown (analysis/index.Rmd
) and HTML
(docs/index.html
) files. If you’ve configured a remote Git
repository (see ?wflow_git_remote
), click on the hyperlinks
in the table below to view the files as they were in that past version.
File | Version | Author | Date | Message |
---|---|---|---|---|
Rmd | b381b5b | DrThomasOneil | 2024-12-26 | Start workflowr project. |
Welcome to the official site for the CVR Analysis User Group! Whether you’re just starting out with R or looking to strengthen your skills, this site is designed to foster a digital community centred around biomedical research programmatic analysis.
Here, you’ll find:
Workshop material will aim to use publicly available data. Therefore, you will not need to rely on uploaded data from the creators. Rather, the workshop set-ups will include scripts for downloading
A wetlab researcher equipped with the power of programmatic analysis is a powerful scientist. We aim to make R more accessible and practical for such biomedical researchers.
This site is organised into several sections to help you quickly find what you need:
Bookmark this site for quick access to scripts and updates as workshops progress.
We are also always looking for feedback. Please reach out to myself or others.
If you are new analytic programming, please use this time to get familiar with R (See: Getting Started in R).
Test
Test after
This site was last updated
2025-05-07