Last updated: 2023-05-12

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Species data

Introduction

This document outline the process to amalgamate species data for FACE-IT project

── Attaching core tidyverse packages ──────────────────────── tidyverse 2.0.0 ──
✔ dplyr     1.1.1     ✔ readr     2.1.4
✔ forcats   1.0.0     ✔ stringr   1.5.0
✔ ggplot2   3.4.2     ✔ tibble    3.2.1
✔ lubridate 1.9.2     ✔ tidyr     1.3.0
✔ purrr     1.0.1     
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag()    masks stats::lag()
ℹ Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors


sessionInfo()
R version 4.2.3 (2023-03-15 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19045)

Matrix products: default

locale:
[1] LC_COLLATE=French_France.utf8  LC_CTYPE=French_France.utf8   
[3] LC_MONETARY=French_France.utf8 LC_NUMERIC=C                  
[5] LC_TIME=French_France.utf8    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] lubridate_1.9.2 forcats_1.0.0   stringr_1.5.0   dplyr_1.1.1    
 [5] purrr_1.0.1     readr_2.1.4     tidyr_1.3.0     tibble_3.2.1   
 [9] ggplot2_3.4.2   tidyverse_2.0.0 workflowr_1.7.0

loaded via a namespace (and not attached):
 [1] tidyselect_1.2.0 xfun_0.38        bslib_0.4.2      colorspace_2.1-0
 [5] vctrs_0.6.1      generics_0.1.3   htmltools_0.5.5  yaml_2.3.7      
 [9] utf8_1.2.3       rlang_1.1.0      jquerylib_0.1.4  later_1.3.0     
[13] pillar_1.9.0     glue_1.6.2       withr_2.5.0      lifecycle_1.0.3 
[17] munsell_0.5.0    gtable_0.3.3     evaluate_0.20    knitr_1.42      
[21] callr_3.7.3      tzdb_0.3.0       fastmap_1.1.1    httpuv_1.6.9    
[25] ps_1.7.4         fansi_1.0.4      Rcpp_1.0.10      promises_1.2.0.1
[29] scales_1.2.1     cachem_1.0.7     jsonlite_1.8.4   fs_1.6.1        
[33] hms_1.1.3        digest_0.6.31    stringi_1.7.12   processx_3.8.0  
[37] getPass_0.2-2    rprojroot_2.0.3  grid_4.2.3       cli_3.6.1       
[41] tools_4.2.3      magrittr_2.0.3   sass_0.4.5       whisker_0.4.1   
[45] pkgconfig_2.0.3  timechange_0.2.0 rmarkdown_2.21   httr_1.4.5      
[49] rstudioapi_0.14  R6_2.5.1         git2r_0.32.0     compiler_4.2.3