License

Last updated: 2022-04-26

Checks: 2 0

Knit directory: S:/KJP_Biolabor/Projects/scSeq_Hefendehl/

This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: 3277c08

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version 3277c08. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .Rproj.user/
    Ignored:    data/ReloadAllData_Hefendehl_Stroke_Dec'21.RData
    Ignored:    data/Sample_Tables/
    Ignored:    data/counts.csv
    Ignored:    data/genecounts.csv
    Ignored:    data/microglia_protein.rds
    Ignored:    data/samples.integrated.RData
    Ignored:    data/tx2genes.csv
    Ignored:    output/Descriptives.Rmd
    Ignored:    output/Descriptives.docx

Untracked files:
    Untracked:  geneviewer/Dataset.RData
    Untracked:  workflow_helper.R

Unstaged changes:
    Modified:   geneviewer/app.R
    Modified:   geneviewer/rsconnect/shinyapps.io/molgenlab/geneviewer.dcf

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

There are no past versions. Publish this analysis with wflow_publish() to start tracking its development.

You are free to: Share — copy and redistribute the material in any medium or format Adapt — remix, transform, and build upon the material for any purpose, even commercially.

This license is acceptable for Free Cultural Works. The licensor cannot revoke these freedoms as long as you follow the license terms.

Under the following terms: Attribution — You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.

No additional restrictions — You may not apply legal terms or technological measures that legally restrict others from doing anything the license permits.