Last updated: 2020-04-23

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Knit directory: MINTIE_paper_analysis/

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Rmd 9f95a7c Marek Cmero 2020-04-15 Start workflowr project.

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

MINTIE is a Method for Inferring Novel Transcripts and Isoforms using Equivalence classes.

This site contains the code for generating the figures and analyses presented in the MINTIE paper.

Analysis

  • Simulation benchmarking – comparison of variants found by MINTIE and 7 other methods in a simulated data set of 1,500 variants.