Last updated: 2020-03-05

Checks: 2 0

Knit directory: rss-net/

This reproducible R Markdown analysis was created with workflowr (version 1.6.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: aef978c

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility. The version displayed above was the version of the Git repository at the time these results were generated.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated: 


Ignored files:
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    examples/ibd2015_nkcell/ibd2015_Primary_Natural_Killer_cells_from_peripheral_blood_NK_out_66.mat
    Ignored:    examples/ibd2015_nkcell/randinit_results/
    Ignored:    examples/ibd2015_nkcell/results/

Unstaged changes:
    Modified:   rmd/ibd2015_nkcell.Rmd

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the R Markdown and HTML files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view them.

File Version Author Date Message
Rmd aef978c xiangzhu 2020-03-05 wflow_publish(“rmd/index.Rmd”)
html fa3a812 xiangzhu 2020-02-29 Build site.
Rmd ae0293e xiangzhu 2020-02-29 wflow_publish(“rmd/index.Rmd”)
html 822011d xiangzhu 2019-08-23 Build site.
html d610537 xiangzhu 2019-08-23 rename doc folder
html 71b62db xiangzhu 2019-08-23 rename doc folder
html c29572b xiangzhu 2019-08-23 Build site.
Rmd 40ce70d xiangzhu 2019-08-23 wflow_publish(“rmd/index.Rmd”)
html 1cc57e6 xiangzhu 2019-08-23 Build site.
Rmd 167e314 xiangzhu 2019-08-23 wflow_publish(“rmd/index.Rmd”)
html b16c736 xiangzhu 2019-08-23 Build site.
Rmd 040f663 xiangzhu 2019-08-23 wflow_publish(“rmd/index.Rmd”)
Rmd 32e9e0f xiangzhu 2019-08-23 rename rmd folder

Welcome to RSS-NET wiki!

This wiki hosts the following documentation pages of RSS-NET methods. If you have any question or suggestion about RSS-NET, please feel free to create a new issue and/or send an email to xiangzhu[at]stanford.edu.

If you find RSS-NET methods and/or codes useful for your work, please kindly cite the following research article.

Add RSS-NET citation.

Installation

This page provides instructions for installing RSS-NET software.

Examples

This page gives end-to-end examples of using RSS-NET methods and software.

Functionalities

This page outlines functions and scripts associated with RSS-NET methods.

FAQs

This page answers frequently ask questions (FAQs) about RSS-NET methods and software.

News

This page lists progress updates related to RSS-NET methods and software.

Icons used in this wiki are credited to the Noun Project.