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Last updated: 2021-05-07

Checks: 2 0

Knit directory: booksn_dispersantes/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: d1f275c

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version d1f275c. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    data/.DS_Store

Untracked files:
    Untracked:  analysis/composed_plots.Rmd
    Untracked:  analysis/turnover.Rmd
    Untracked:  data/passerine_ab.csv
    Untracked:  data/passerine_abbrev.csv
    Untracked:  output/abundance_time/passerine_abtotal.csv
    Untracked:  output/abundance_time/passerine_abtotal_compare.csv
    Untracked:  output/diversity/alfa_diversity.csv
    Untracked:  output/turnover/

Unstaged changes:
    Modified:   analysis/diversity.Rmd
    Deleted:    analysis/temporal-beta-diveristy.Rmd
    Modified:   code/computeTBI.R
    Modified:   data/birds.csv
    Deleted:    data/data_raw/~$Aves_SN_meses_reproduccion.xlsx
    Modified:   data/passerine.csv
    Modified:   output/betadiversity/plot_betadiversity.pdf
    Modified:   output/diversity/diversity_habitat.pdf
    Modified:   output/mktrend/plot_mktrend.pdf

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File	Version	Author	Date	Message
Rmd	d1f275c	Antonio J Perez-Luque	2021-05-07	add link to index
html	1b33ab5	Antonio J Perez-Luque	2021-05-05	Build site.
Rmd	360b262	Antonio J Perez-Luque	2021-05-05	add link to index
html	b3c6987	Antonio J Perez-Luque	2021-05-04	Build site.
Rmd	21da502	Antonio J Perez-Luque	2021-05-04	generate betadiversity analysis
html	12af27d	Antonio J Perez-Luque	2021-05-03	Build site.
Rmd	5306189	Antonio J Perez-Luque	2021-05-03	compute diversity (alpha) analysis
html	1f2c2c2	Antonio J Perez-Luque	2021-05-03	Build site.
html	b0312df	Antonio J Perez-Luque	2021-05-03	Build site.
Rmd	62e3c0d	Antonio J Perez-Luque	2021-05-03	include file into index
html	0b2e6bf	Antonio J Perez-Luque	2021-04-28	Build site.
Rmd	b11b323	Antonio J Perez-Luque	2021-04-28	change notebook
html	fb6a36e	Antonio J Perez-Luque	2021-04-28	Build site.
Rmd	75e7976	Antonio J Perez-Luque	2021-04-28	change dot
html	0f96f48	Antonio J Perez-Luque	2021-04-28	Build site.
Rmd	a32c2b4	Antonio J Perez-Luque	2021-04-28	change title
html	1c57017	Antonio J Perez-Luque	2021-04-28	Build site.
Rmd	c389b2a	Antonio J Perez-Luque	2021-04-28	fix error type link
html	7281d42	Antonio J Perez-Luque	2021-04-28	Build site.
Rmd	1ed7427	Antonio J Perez-Luque	2021-04-28	Add my first analysis
html	a5aa12d	Antonio J Perez-Luque	2021-04-28	Build site.
Rmd	458a9ac	Antonio J Perez-Luque	2021-04-28	Start workflowr project.