Last updated: 2024-06-20
Checks: 2 0
Knit directory: LocksofLineage/
This reproducible R Markdown analysis was created with workflowr (version 1.7.1). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.
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in the table below to view the files as they were in that past version.
| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | 659ef2c | Sarah E Taylor | 2024-06-19 | Add RevBayes workflow documentation |
| html | 659ef2c | Sarah E Taylor | 2024-06-19 | Add RevBayes workflow documentation |
| html | 768856f | Sarah E Taylor | 2024-03-17 | Build site. |
| Rmd | 3818f0b | Sarah E Taylor | 2024-03-17 | Analysis for the poster. |
| html | 23101c1 | Sarah E Taylor | 2024-02-29 | Build site. |
| html | 05cdbbb | Sarah E Taylor | 2024-02-29 | Build site. |
| html | 385c10f | Sarah E Taylor | 2024-02-29 | Build site. |
| html | 4e1c9c0 | Sarah E Taylor | 2024-02-29 | Build site. |
| Rmd | b54f044 | Sarah E Taylor | 2024-02-29 | Recoded the traits and re-did the logistic regressions and odds ratio matrices |
| html | 9df58e3 | Sarah E Taylor | 2024-02-26 | Build site. |
| Rmd | 61dc047 | Sarah E Taylor | 2024-02-26 | Removed unnecessary files and redid the analysis. |
| Rmd | bc5e788 | Sarah E Taylor | 2024-02-13 | Added the looped logistic regressions and their figures. |
| html | bc5e788 | Sarah E Taylor | 2024-02-13 | Added the looped logistic regressions and their figures. |
| html | cce01fc | Sarah E Taylor | 2024-02-06 | Build site. |
| Rmd | c51166c | Sarah E Taylor | 2024-02-06 | Formatting the Home page. |
| html | f7579f9 | Sarah E Taylor | 2024-02-06 | Build site. |
| Rmd | ca79f1f | Sarah E Taylor | 2024-02-06 | Added the regression comparing head locations for both of sexual traits. |
| html | f433f5f | Sarah E Taylor | 2024-02-06 | Build site. |
| Rmd | 0e0ca22 | Sarah E Taylor | 2024-02-06 | Updated where my data file is, added the trait matrix. |
| html | 2d154e8 | Sarah E Taylor | 2024-02-01 | Build site. |
| Rmd | e18d74c | Sarah E Taylor | 2024-02-01 | Added a page on cleaning my data. |
| html | 3d95256 | Sarah E Taylor | 2024-01-23 | Build site. |
| Rmd | 244e2a4 | Sarah E Taylor | 2024-01-23 | Added links to analysis to the home page. |
| html | f182c38 | Sarah E Taylor | 2024-01-19 | Build site. |
| html | 2e682ed | Sarah E Taylor | 2024-01-19 | Build site. |
| html | c8dd1c1 | Sarah E Taylor | 2024-01-18 | Build site. |
| html | 7f6ef4d | Sarah E Taylor | 2024-01-18 | Build site. |
| html | 9f0b8a5 | Sarah E Taylor | 2024-01-18 | Build site. |
| html | 7fbf107 | Sarah E Taylor | 2024-01-18 | Build site. |
| html | 05b31cd | Sarah E Taylor | 2024-01-18 | Build site. |
| html | 9daebee | Sarah E Taylor | 2024-01-18 | Build site. |
| html | b40af97 | Sarah E Taylor | 2024-01-18 | Build site. |
| html | 7da692e | Sarah E Taylor | 2024-01-18 | Build site. |
| html | f07be57 | Sarah E Taylor | 2024-01-18 | Build site. |
| html | 8f37735 | Sarah E Taylor | 2024-01-18 | Build site. |
| html | 3da0ef1 | Sarah E Taylor | 2024-01-18 | Build site. |
| html | d74021c | Sarah E Taylor | 2024-01-12 | Build site. |
| html | bd9db3c | Sarah E Taylor | 2024-01-11 | Build site. |
| html | eb2a6ce | Sarah Taylor | 2023-11-17 | Build site. |
| Rmd | 36907e8 | Sarah Taylor | 2023-11-17 | Publish the initial files for LocksofLineage |
| Rmd | b574957 | Sarah Taylor | 2023-11-17 | Start workflowr project. |
“From Birth to Maturity: A Phylogenetic Investigation of Sexual Dimorphism in Primates” coming soon to an AABA poster session!
Hair patterning serves as a mechanism for complex visual and social signaling in primates. Our study offers a comprehensive analysis, focusing on two primary aspects: 1) Natal Coats and 2) Adult Sexual Dimorphism. Adult Sexual Dimorphism is divided into two sub-aspects: 2a) Sexual Dichromatism and 2b) Hair Morphology Dimorphism (beards, capes, etc). We analyzed data from 244 primate species to investigate these traits and their interrelationships in a phylogenetic context. Natal coats were observed in 50% of the species. Using phylogenetic logistic regression, we found that 82% of species with hair morphology dimorphism and 84% of species with sexual dichromatism exhibited natal coats. In other words, species with some form of adult hair sexual dimorphism were more likely to have natal coats. Sexual dichromatism was present in 33% of species (partial and complete), with females lighter than males in 58% of these species. Among the 15 species with complete (full-body) dichromatism, only one had darker females. For partial dichromatism, no single body part was consistently affected across species. Hair morphology dimorphism was observed in 23% of species. In a focused analysis of 55 species with dimorphism, 23 displayed dimorphism exclusively on the head and face, 6 solely on the pubis, and dimorphism varied across affected body parts in the remaining species. Our research delivers a detailed trait-wise analysis across primate species, providing key insights that pave the way for future studies on both social signaling mechanisms and biological underpinnings of sexual dimorphism in primates.
Here’s a link to my analysis!
Here is a link to the basic pipeline to format the data for RevBayes and instructions to run it in the terminal!