Last updated: 2021-07-02

Checks: 7 0

Knit directory: ampel-leipzig-meld/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


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The results in this page were generated with repository version c96bbef. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

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    Ignored:    _targets/
    Ignored:    container/

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These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
html d9c37ec Sebastian Gibb 2021-07-02 chore: rebuild site
Rmd ce260af Sebastian Gibb 2021-07-02 feat: add first citations
Rmd 7686ce9 Sebastian Gibb 2021-07-02 refactor: remove about page
html 81fcc75 Sebastian Gibb 2021-06-11 chore: rebuild site
html 783c49f Sebastian Gibb 2021-06-11 chore: rebuild site
html aac7ea8 Sebastian Gibb 2021-06-11 chore: rebuild site
html 602e714 Sebastian Gibb 2021-06-11 chore: rebuild site
html 24a733a Sebastian Gibb 2021-06-11 docs: rebuild site
html 945a45a Sebastian Gibb 2021-06-11 chore: rebuild site
html f4d6b47 Sebastian Gibb 2021-06-04 Build site.
Rmd a08fecb Sebastian Gibb 2021-06-04 chore: initial wflow site commit
Rmd 33b1c88 Sebastian Gibb 2021-06-04 chore: start workflowr project

Acknowledgment

AMPEL

This work is part of the AMPEL (Analysis and Reporting System for the Improvement of Patient Safety through Real-Time Integration of Laboratory Findings) project (Eckelt et al. 2020).

This measure is co-funded with tax revenues based on the budget adopted by the members of the Saxon State Parliament.

R Packages

This site is generated by combining the workflowr (Blischak, Carbonetto, and Stephens 2019) and the targets (Landau 2021) package.

A visual network of the pipeline is depicted here.

References

Blischak, John D, Peter Carbonetto, and Matthew Stephens. 2019. “Creating and Sharing Reproducible Research Code the Workflowr Way [Version 1; Peer Review: 3 Approved].” F1000Research 8 (1749). https://doi.org/10.12688/f1000research.20843.1.

Eckelt, F., J. Remmler, T. Kister, M. Wernsdorfer, H. Richter, M. Federbusch, M. Adler, et al. 2020. “Verbesserte Patientensicherheit Durch “Clinical Decision Support Systems” in Der Labormedizin.” Der Internist 61 (5): 452–59. https://doi.org/10.1007/s00108-020-00775-3.

Landau, William Michael. 2021. “The Targets R Package: A Dynamic Make-Like Function-Oriented Pipeline Toolkit for Reproducibility and High-Performance Computing.” Journal of Open Source Software 6 (57): 2959. https://doi.org/10.21105/joss.02959.


sessionInfo()
R version 4.1.0 (2021-05-18)
Platform: x86_64-unknown-linux-gnu (64-bit)

Matrix products: default
BLAS/LAPACK: /gnu/store/bs9pl1f805ins80xaf4s3n35a0x2lyq3-openblas-0.3.9/lib/libopenblasp-r0.3.9.so

locale:
 [1] LC_CTYPE=de_DE.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=de_DE.UTF-8        LC_COLLATE=de_DE.UTF-8    
 [5] LC_MONETARY=de_DE.UTF-8    LC_MESSAGES=de_DE.UTF-8   
 [7] LC_PAPER=de_DE.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.6        whisker_0.4       knitr_1.33        magrittr_2.0.1   
 [5] workflowr_1.6.2   R6_2.5.0          rlang_0.4.11      fansi_0.5.0      
 [9] stringr_1.4.0     tools_4.1.0       xfun_0.23         utf8_1.2.1       
[13] git2r_0.28.0      htmltools_0.5.1.1 ellipsis_0.3.2    rprojroot_2.0.2  
[17] yaml_2.2.1        digest_0.6.27     tibble_3.1.2      lifecycle_1.0.0  
[21] crayon_1.4.1      later_1.2.0       vctrs_0.3.8       fs_1.5.0         
[25] promises_1.2.0.1  glue_1.4.2        evaluate_0.14     rmarkdown_2.8    
[29] stringi_1.6.2     compiler_4.1.0    pillar_1.6.1      httpuv_1.6.1     
[33] pkgconfig_2.0.3