Last updated: 2019-10-15

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Knit directory: Comparative_APA/analysis/

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Rmd 25a8b1e brimittleman 2019-10-15 fix name bug add number PAS analysis
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Rmd 36d8ded brimittleman 2019-10-11 add correlation between ind analysis
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Rmd c4db4f0 brimittleman 2019-10-10 add non norm pca and verify bam
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Rmd 1f06329 brimittleman 2019-10-09 add PCA by total and nuclear
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Rmd 920abac brimittleman 2019-10-04 add comaprison to old PAS
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Rmd f914d49 brimittleman 2019-09-02 Start workflowr project.

I am interesting in understanding differential APA between human and chimpanzees. I used 3’ Seq to identify PAS for total and nuclear frations of LCL in both species.

Preparation and QC:

Catalog PAS:

Differential Isoform Analysis: