Last updated: 2019-02-11
workflowr checks: (Click a bullet for more information) ✔ R Markdown file: up-to-date
Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.
✔ Repository version: 5e22c9b
wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:
Ignored files:
Ignored: .DS_Store
Ignored: docs/figure/
Unstaged changes:
Modified: analysis/_site.yml
Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.
| File | Version | Author | Date | Message |
|---|---|---|---|---|
| html | 7af222f | courtneyschiffman | 2019-02-05 | Build site. |
| Rmd | c77dbd3 | courtneyschiffman | 2019-02-05 | wflow_publish(“analysis/publications.Rmd”) |
| html | b4202aa | courtneyschiffman | 2018-12-13 | Build site. |
| Rmd | d9439d5 | courtneyschiffman | 2018-12-13 | wflow_publish(c(“analysis/about.Rmd”, “analysis/publications.Rmd”, |
| html | d0ccc3c | courtneyschiffman | 2018-12-13 | Build site. |
| html | b4fb801 | courtneyschiffman | 2018-12-13 | Build site. |
| Rmd | 8886030 | courtneyschiffman | 2018-12-13 | wflow_publish(c(“analysis/cv.Rmd”, “analysis/”)) |
Kang, et al., “Electrophoretic cytopathology resolves ERB2 forms with single-cell”, NPJ Precision Oncology, 2018.
Perttula, et al., “Lipidomic features associated with colorectal cancer in a prospective cohort”, BMC Cancer, 2018.
Petrick, et al., “An untargeted metabolomics method for archived newborn dried blood spots in epidemiological studies”, Metabolomics, 2017.
Petrick, et al., “Metabolomics of Neonatal Blood Spots Reveals Lipid Associations with Pediatric Acute Lymphoblastic Leukemia,” Cancer Letters, 2019. Under review.
Schiffman et al., “SIDEseq: a cell similarity measure defined by shared identified differentially expressed genes for single-cell RNA-sequencing data”, Statistics in Biosciences, 2017.
Schiffman et al., “Identification of gene expression predictors of occupational benzene exposure,” PLOS ONE, 2018.
Schiffman et al., “Data-adaptive filtering of untargeted LC-MS metabolomics data.,” BMC Bioinformatics, 2019. under review.
Yano, et al., “Untargeted Adductomics of Cys34 Modification to Human Serum Albumin in Newborn Dried Blood Spots,” ABC, 2019.
This reproducible R Markdown analysis was created with workflowr 1.1.1