Last updated: 2019-06-19
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Knit directory: phantom_purge/
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| Rmd | 7ca03da | rfarouni | 2019-04-24 | update |
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| html | bc37dab | rfarouni | 2019-04-23 | Build site. |
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| Rmd | a556d1e | rfarouni | 2019-03-27 | Start workflowr project. |
This website hosts code and R Markdown notebooks implementing the statistical modeling approach to estimating the sample index hopping rate and purging phantom molecules in multiplexed droplet-based single-cell RNA-seq data.
Statistical modeling, estimation, and remediation of sample index hopping in multiplexed droplet-based single-cell RNA-seq data. (R. Farouni and H. S. Najafabadi, 2019).
The bioRxiv preprint describing the approach can be accessed here.