Last updated: 2020-11-15

Checks: 2 0

Knit directory: muse/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version ab3533f. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    analysis/.Rhistory

Untracked files:
    Untracked:  analysis/linear_regression.Rmd

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.


These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
Rmd ab3533f davetang 2020-11-15 Fix link
html 5dc50c6 davetang 2020-11-15 Build site.
Rmd 9639627 davetang 2020-11-15 Complex UpSet plots
html 2db13ea davetang 2020-11-10 Build site.
Rmd 268312f davetang 2020-11-10 wflow_publish(files = c(“analysis/index.Rmd”, “analysis/google_trends.Rmd”,
html 03f05e8 davetang 2020-10-18 Build site.
Rmd f79342a davetang 2020-10-18 Markov chain post
html 586b91f Dave Tang 2020-07-12 Build site.
Rmd b1d6edd Dave Tang 2020-07-12 pheatmap
Rmd b3f3dc1 Dave Tang 2020-07-12 Start workflowr project.

I refer to my blog often to look up notes and code I have written. I will recreate my blog posts here, to make it easier to reuse and also maintain my code.

Blog posts