Last updated: 2021-07-14

Checks: 6 1

Knit directory: false.alarm/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


The R Markdown file has unstaged changes. To know which version of the R Markdown file created these results, you’ll want to first commit it to the Git repo. If you’re still working on the analysis, you can ignore this warning. When you’re finished, you can run wflow_publish to commit the R Markdown file and build the HTML.

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Ignored files:
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    .history/
    Ignored:    .httr-oauth
    Ignored:    _targets/
    Ignored:    dev/
    Ignored:    inst/extdata/
    Ignored:    papers/aime2021/aime2021.md
    Ignored:    papers/paper_draft/paper_draft.md
    Ignored:    pdfs/
    Ignored:    renv/library/
    Ignored:    renv/staging/
    Ignored:    src/RcppExports.o
    Ignored:    src/false.alarm.dll
    Ignored:    src/fft.o
    Ignored:    src/mass.o
    Ignored:    src/math.o
    Ignored:    src/mpx.o
    Ignored:    src/scrimp.o
    Ignored:    src/stamp.o
    Ignored:    src/stomp.o
    Ignored:    src/windowfunc.o
    Ignored:    thesis/thesis.log

Untracked files:
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    Untracked:  protocol/roadmap_original.svg
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    Untracked:  scripts/

Unstaged changes:
    Modified:   .Rbuildignore
    Modified:   NAMESPACE
    Modified:   R/RcppExports.R
    Deleted:    R/compute_matrix_profile.R
    Deleted:    R/filter_data.R
    Deleted:    R/find_all_files.R
    Deleted:    R/fit_model.R
    Deleted:    R/fluss.R
    Deleted:    R/functions.R
    Deleted:    R/main.R
    Deleted:    R/make_idxs_split.R
    Modified:   R/mpx.R
    Deleted:    R/plot_ecg.R
    Deleted:    R/read_ecg.R
    Deleted:    R/test_model.R
    Modified:   _targets.R
    Modified:   analysis/_site.yml
    Modified:   analysis/about.Rmd
    Modified:   analysis/index.Rmd
    Modified:   analysis/license.Rmd
    Modified:   analysis/report.Rmd
    Deleted:    analysis/workflowr.png
    Modified:   false.alarm.Rproj
    Deleted:    man/compute_matrix_profile.Rd
    Modified:   man/false.alarm.Rd
    Deleted:    man/filter_data.Rd
    Deleted:    man/find_all_files.Rd
    Deleted:    man/fit_model.Rd
    Deleted:    man/fluss_extract.Rd
    Deleted:    man/make_idxs_split.Rd
    Modified:   man/mp_algos.Rd
    Deleted:    man/plot_ecg.Rd
    Deleted:    man/read_ecg.Rd
    Deleted:    man/test_model.Rd
    Modified:   papers/paper_draft/paper_draft.Rmd
    Modified:   papers/paper_draft/paper_draft.nb.html
    Modified:   papers/references.bib
    Modified:   src/RcppExports.cpp
    Modified:   src/mpx.cpp

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.


These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
html bf772a5 GitHub Actions 2021-03-24 Build site.
Rmd b869025 Francisco Bischoff 2021-03-24 targets and workflowr
html 52e7f0b GitHub Actions 2021-03-24 Build site.
Rmd c87e8e1 Francisco Bischoff 2021-03-24 targets and workflowr
Rmd 7c3cc31 Francisco Bischoff 2021-03-23 Targets
html 7c3cc31 Francisco Bischoff 2021-03-23 Targets
html 01a7ace Francisco Bischoff 2020-07-23 Refactor
html 5f450d2 Francisco Bischoff 2020-05-05 gh-pages placeholder

minimal R version Licence

Dataset hosted by:

TLDR;

This website contains all the necessary for reproducibility of this PhD. It is build joining three frameworks:

Use the big button above to navigate thorough the older commits.

Use the top menu for further information and the thesis itself.

Last Targets Run network:


R version 4.1.0 (2021-05-18)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19042)

Matrix products: default

locale:
[1] LC_COLLATE=Portuguese_Portugal.1252  LC_CTYPE=C                          
[3] LC_MONETARY=Portuguese_Portugal.1252 LC_NUMERIC=C                        
[5] LC_TIME=Portuguese_Portugal.1252    

attached base packages:
[1] stats     graphics  grDevices datasets  utils     methods   base     

other attached packages:
[1] visNetwork_2.0.9 here_1.0.1      

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.7            pillar_1.6.1          compiler_4.1.0       
 [4] bslib_0.2.5.1         later_1.2.0           languageserver_0.3.10
 [7] jquerylib_0.1.4       git2r_0.28.0          workflowr_1.6.2      
[10] tools_4.1.0           digest_0.6.27         jsonlite_1.7.2       
[13] evaluate_0.14         lifecycle_1.0.0       tibble_3.1.2         
[16] pkgconfig_2.0.3       rlang_0.4.11          yaml_2.2.1           
[19] xfun_0.24             stringr_1.4.0         xml2_1.3.2           
[22] knitr_1.33            htmlwidgets_1.5.3     fs_1.5.0             
[25] vctrs_0.3.8           sass_0.4.0            rprojroot_2.0.2      
[28] glue_1.4.2            R6_2.5.0              fansi_0.5.0          
[31] rmarkdown_2.9.2       magrittr_2.0.1        whisker_0.4          
[34] promises_1.2.0.1      ellipsis_0.3.2        htmltools_0.5.1.1    
[37] renv_0.13.2           httpuv_1.6.1          utf8_1.2.1           
[40] stringi_1.6.2         crayon_1.4.1