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Last updated: 2020-04-03
Checks: 2 0
Knit directory: duplex_sequencing_screen/
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | 52f6884 | haiderinam | 2020-04-03 | wflow_publish(“analysis/*.Rmd“) |
| html | 6af2cdc | haiderinam | 2020-04-03 | Build site. |
| Rmd | 5cda9d3 | haiderinam | 2020-04-03 | wflow_publish(“analysis/*.Rmd“) |
| html | 0b9b87b | haiderinam | 2020-04-02 | Build site. |
| Rmd | fc5b9c0 | haiderinam | 2020-04-02 | wflow_publish(“analysis/*.Rmd“) |
| html | 2bce927 | haiderinam | 2020-04-02 | Build site. |
| html | 4ed9b35 | haiderinam | 2020-04-02 | Build site. |
| Rmd | e31836a | haiderinam | 2020-04-02 | wflow_publish(“analysis/*.Rmd“) |
| html | 99181d5 | haiderinam | 2020-04-02 | Build site. |
| Rmd | 17c01d4 | haiderinam | 2020-04-02 | wflow_publish(“analysis/index.Rmd”) |
| html | 1e2f469 | haiderinam | 2020-04-02 | Build site. |
| html | e11eec5 | haiderinam | 2020-04-02 | Build site. |
| Rmd | 0053f96 | haiderinam | 2020-04-02 | wflow_publish(“analysis/*.Rmd“) |
| html | b1cbbfa | haiderinam | 2020-04-02 | Build site. |
| Rmd | 703346a | haiderinam | 2020-04-02 | Start workflowr project. |
Duplex Sequencing Spike-Ins
Click here for the script that reads mutation annotation data and generates dataframes with annotated variants and the correct cell counts
Click here for initial growth rate plots
Click here for growth rate plots for ENU mutants
Click here for analysis looking at whether we achieved our desired depth of coverages
Click here for analysis looking at how well our data predicts BCRABL clinical abundance compared to conventional IC50s
Click here to be redirected to the github page that contains all my data.
What is in each directory:
- Data: contains data downloaded prior to analyses.
- Output: contains data that the code makes
- Analysis: contains your Rmarkdown files with the code.
- Docs: contain the html output from the Rmd files in the analysis directory.
- Code: contains .R files that are functions that the Rmd files in the analysis folder use.