Last updated: 2019-01-09

This reproducible R Markdown analysis was created with workflowr (version The Report tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility. The version displayed above was the version of the Git repository at the time these results were generated.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:

Ignored files:
    Ignored:    .DS_Store
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    figure/.DS_Store
    Ignored:    figure/ch02/.DS_Store

Untracked files:
    Untracked:  audition-figure/
    Untracked:  code/counts_per_sample.txt
    Untracked:  code/table-s1.txt
    Untracked:  data/counts_per_sample.txt
    Untracked:  data/test.rds
    Untracked:  docs/figure/alternative.Rmd/
    Untracked:  docs/figure/ch04.Rmd/
    Untracked:  factorial-dox.rds

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the R Markdown and HTML files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view them.

File Version Author Date Message
html f440a87 John Blischak 2018-08-20 Build site.
html 9b58c25 John Blischak 2018-05-23 Build site.
html 79a1ea4 John Blischak 2018-05-23 Build site.
Rmd 3e36241 John Blischak 2018-05-23 Update to 1.0
html 3e36241 John Blischak 2018-05-23 Update to 1.0
html 17de7de John Blischak 2018-01-11 Build site.
Rmd 93052d7 John Blischak 2018-01-11 Apply workflowr infrastructure. Committed files manually.

The lesson text is licensed under CC-BY. For attribution, please cite the author as John Blischak and include the link to the GitHub repo:

The code is licensed under CC0 (i.e. in the public domain).