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library(tidyverse)

1 Definition

Following parameterizations were chosen to run analysis and display results:

depth_levels = c(0, 150, 500, 2000)

depth_levels_33 <- c(
  0,
  10,
  20,
  30,
  50,
  75,
  100,
  125,
  150,
  200,
  250,
  300,
  400,
  500,
  600,
  700,
  800,
  900,
  1000,
  1100,
  1200,
  1300,
  1400,
  1500,
  1750,
  2000,
  2500,
  3000,
  3500,
  4000,
  4500,
  5000,
  5500
)

slabs_Atl <-
  c(
    -Inf,
    26.00,
    26.50,
    26.75,
    27.00,
    27.25,
    27.50,
    27.75,
    27.85,
    27.95,
    28.05,
    28.10,
    28.15,
    28.20,
    Inf
  )

slabs_Ind_Pac <-
  c(-Inf,
    26.00,
    26.50,
    26.75,
    27.00,
    27.25,
    27.50,
    27.75,
    27.85,
    27.95,
    28.05,
    28.10,
    Inf)

longitude_sections_basin <- c(335.5, 190.5, 70.5)
longitude_sections_regular <- seq(30.5, 380.5, 20)

parameters <-
  lst(
    Version_ID = "V_101",
    flag_f = c(2, 0),
    flag_qc = 1,
    depth_min = 150,
    depth_shallow_max = 500,
    bottomdepth_min = 500,
    lat_max = 65,
    lat_min = -85,
    gamma_min = 26,
    year_JGOFS_start = 1981,
    year_JGOFS_end = 1999,
    year_GOSHIP_end = 2012,
    lon_Atl_section = 335.5,
    lon_Pac_section = 190.5,
    lon_Ind_section = 70.5,
    lat_Atl_profile = 40.5,
    lat_section_N = 59.5,
    lat_section_S = -59.5,
    longitude_sections_basin = longitude_sections_basin,
    longitude_sections_regular = longitude_sections_regular,
    inventory_depth = 3000,
    plotting_depth = 4500,
    cruises_meridional = 1041,
    predictors_max = 5,
    predictors_min = 2,
    MLR_number = 10,
    depth_levels = depth_levels,
    depth_levels_33 = depth_levels_33,
    slabs_Atl = slabs_Atl,
    slabs_Ind_Pac = slabs_Ind_Pac,
    breaks_cant_pos_inv = c(seq(0,16,2),Inf),
    breaks_cant_inv = c(-Inf,seq(-16,16,2),Inf),
    breaks_cant_inv_offset = c(-Inf, seq(-15, 15, 3), Inf),
    breaks_cant_pos = c(seq(0, 18, 1), Inf),
    breaks_cant = c(-Inf,seq(-16,16,2),Inf),
    breaks_cant_offset = c(-Inf,seq(-8,8,),Inf),
    rCP = 117,
    rNP = 16,
    rPO = 170,
    rPO_offset = 1.95,
    preind_atm_pCO2 = 280
  )

parameters
$Version_ID
[1] "V_101"

$flag_f
[1] 2 0

$flag_qc
[1] 1

$depth_min
[1] 150

$depth_shallow_max
[1] 500

$bottomdepth_min
[1] 500

$lat_max
[1] 65

$lat_min
[1] -85

$gamma_min
[1] 26

$year_JGOFS_start
[1] 1981

$year_JGOFS_end
[1] 1999

$year_GOSHIP_end
[1] 2012

$lon_Atl_section
[1] 335.5

$lon_Pac_section
[1] 190.5

$lon_Ind_section
[1] 70.5

$lat_Atl_profile
[1] 40.5

$lat_section_N
[1] 59.5

$lat_section_S
[1] -59.5

$longitude_sections_basin
[1] 335.5 190.5  70.5

$longitude_sections_regular
 [1]  30.5  50.5  70.5  90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5
[13] 270.5 290.5 310.5 330.5 350.5 370.5

$inventory_depth
[1] 3000

$plotting_depth
[1] 4500

$cruises_meridional
[1] 1041

$predictors_max
[1] 5

$predictors_min
[1] 2

$MLR_number
[1] 10

$depth_levels
[1]    0  150  500 2000

$depth_levels_33
 [1]    0   10   20   30   50   75  100  125  150  200  250  300  400  500  600
[16]  700  800  900 1000 1100 1200 1300 1400 1500 1750 2000 2500 3000 3500 4000
[31] 4500 5000 5500

$slabs_Atl
 [1]  -Inf 26.00 26.50 26.75 27.00 27.25 27.50 27.75 27.85 27.95 28.05 28.10
[13] 28.15 28.20   Inf

$slabs_Ind_Pac
 [1]  -Inf 26.00 26.50 26.75 27.00 27.25 27.50 27.75 27.85 27.95 28.05 28.10
[13]   Inf

$breaks_cant_pos_inv
 [1]   0   2   4   6   8  10  12  14  16 Inf

$breaks_cant_inv
 [1] -Inf  -16  -14  -12  -10   -8   -6   -4   -2    0    2    4    6    8   10
[16]   12   14   16  Inf

$breaks_cant_inv_offset
 [1] -Inf  -15  -12   -9   -6   -3    0    3    6    9   12   15  Inf

$breaks_cant_pos
 [1]   0   1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18
[20] Inf

$breaks_cant
 [1] -Inf  -16  -14  -12  -10   -8   -6   -4   -2    0    2    4    6    8   10
[16]   12   14   16  Inf

$breaks_cant_offset
 [1] -Inf   -8   -7   -6   -5   -4   -3   -2   -1    0    1    2    3    4    5
[16]    6    7    8  Inf

$rCP
[1] 117

$rNP
[1] 16

$rPO
[1] 170

$rPO_offset
[1] 1.95

$preind_atm_pCO2
[1] 280

2 Write file

parameters %>%
  write_rds(here::here("data/auxillary",
                       "parameters.rds"))

sessionInfo()
R version 4.0.2 (2020-06-22)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18363)

Matrix products: default

locale:
[1] LC_COLLATE=English_Germany.1252  LC_CTYPE=English_Germany.1252   
[3] LC_MONETARY=English_Germany.1252 LC_NUMERIC=C                    
[5] LC_TIME=English_Germany.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] forcats_0.5.0   stringr_1.4.0   dplyr_1.0.0     purrr_0.3.4    
 [5] readr_1.3.1     tidyr_1.1.0     tibble_3.0.3    ggplot2_3.3.2  
 [9] tidyverse_1.3.0 workflowr_1.6.2

loaded via a namespace (and not attached):
 [1] tidyselect_1.1.0 xfun_0.16        haven_2.3.1      colorspace_1.4-1
 [5] vctrs_0.3.2      generics_0.0.2   htmltools_0.5.0  yaml_2.2.1      
 [9] blob_1.2.1       rlang_0.4.7      later_1.1.0.1    pillar_1.4.6    
[13] withr_2.2.0      glue_1.4.1       DBI_1.1.0        dbplyr_1.4.4    
[17] modelr_0.1.8     readxl_1.3.1     lifecycle_0.2.0  munsell_0.5.0   
[21] gtable_0.3.0     cellranger_1.1.0 rvest_0.3.6      evaluate_0.14   
[25] knitr_1.30       httpuv_1.5.4     fansi_0.4.1      broom_0.7.0     
[29] Rcpp_1.0.5       promises_1.1.1   backports_1.1.8  scales_1.1.1    
[33] jsonlite_1.7.0   fs_1.4.2         hms_0.5.3        digest_0.6.25   
[37] stringi_1.4.6    rprojroot_1.3-2  grid_4.0.2       here_0.1        
[41] cli_2.0.2        tools_4.0.2      magrittr_1.5     crayon_1.3.4    
[45] whisker_0.4      pkgconfig_2.0.3  ellipsis_0.3.1   xml2_1.3.2      
[49] reprex_0.3.0     lubridate_1.7.9  assertthat_0.2.1 rmarkdown_2.3   
[53] httr_1.4.2       rstudioapi_0.11  R6_2.4.1         git2r_0.27.1    
[57] compiler_4.0.2