Plots
Below, please find plots of the variables in the following order:
alpha, chlos, dfeos, dissicos, epc100, epc1000, epc1000hard, epc1000soft, epc100hard, epc100soft, epcalc100, fgco2, fice, intdiac, intphyc, intphynd, intpp, intzooc, Kw, mld, no3os, o2os, pco2atm, po4os, sios, sos, spco2, talkos, tos, zeu
Plots for all variables are shown one after the other for the model runs:
# variables <- variables[1]
# experiment_IDs <- experiment_IDs[1]
for (i_experiment_ID in experiment_IDs) {
for (i_variable in variables) {
# i_experiment_ID <- experiment_IDs[1]
# i_variable <- variables[1]
# read list of all files
file <- paste(i_variable,
"_CESM-ETHZ_",
i_experiment_ID,
"_1_gr_1980-2018_v20210607.nc",
sep = "")
print(file)
# read in data
variable_data <-
read_ncdf(paste(path_cmorized_annual,
file,
sep = ""))
# convert to tibble
variable_data_tibble <- variable_data %>%
as_tibble()
# drop units for plotting
variable_data_tibble <- variable_data_tibble %>%
drop_units()
# remove open link to nc file
rm(variable_data)
variable_data_tibble_climatology <-
variable_data_tibble %>%
group_by(lat, lon) %>%
summarise(
"mean" := mean(!!sym(i_variable), na.rm = TRUE),
"min" := min(!!sym(i_variable), na.rm = TRUE),
"max" := max(!!sym(i_variable), na.rm = TRUE)
) %>%
ungroup()
variable_data_tibble_climatology <-
variable_data_tibble_climatology %>%
pivot_longer(c("mean", "min", "max"),
values_to = i_variable,
names_to = "parameter")
print(
variable_data_tibble_climatology %>%
ggplot(aes(lon, lat, fill = !!sym(i_variable))) +
geom_raster(na.rm = TRUE) +
scale_fill_viridis_c(na.value=NA) +
coord_quickmap(expand = 0) +
facet_wrap( ~ parameter, ncol = 2) +
theme(axis.title = element_blank()) +
labs(title = paste("experiment_ID:", i_experiment_ID))
)
variable_data_tibble_time_series <-
variable_data_tibble %>%
group_by(time_mon) %>%
summarise(
"mean" := mean(!!sym(i_variable), na.rm = TRUE),
"min" := min(!!sym(i_variable), na.rm = TRUE),
"max" := max(!!sym(i_variable), na.rm = TRUE)
) %>%
ungroup()
print(
variable_data_tibble_time_series %>%
ggplot() +
geom_ribbon(
aes(
x = time_mon,
ymin = min,
ymax = max,
fill = "min/max"
),
alpha = 0.3
) +
geom_path(aes(
x = time_mon,
y = mean,
col = "mean"
)) +
scale_fill_viridis_d() +
scale_color_viridis_d() +
labs(
title = paste("experiment_ID:", i_experiment_ID),
y = i_variable
) +
theme(legend.title = element_blank())
)
}
}
[1] "alpha_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "chlos_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
Past versions of 2D_variables-3.png
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[1] "dfeos_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "dissicos_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "epc100_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "epc1000_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "epc1000hard_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "epc1000soft_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "epc100hard_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "epc100soft_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "epcalc100_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "fgco2_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "fice_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "intdiac_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "intphyc_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "intphynd_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "intpp_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "intzooc_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "Kw_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "mld_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "no3os_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "o2os_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "pco2atm_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "po4os_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "sios_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "sos_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "spco2_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "talkos_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "tos_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "zeu_CESM-ETHZ_A_1_gr_1980-2018_v20210607.nc"
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[1] "alpha_CESM-ETHZ_B_1_gr_1980-2018_v20210607.nc"
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[1] "chlos_CESM-ETHZ_B_1_gr_1980-2018_v20210607.nc"
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[1] "intphynd_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "intpp_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "intzooc_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "Kw_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "mld_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "no3os_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "o2os_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "pco2atm_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "po4os_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "sios_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "sos_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "spco2_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "talkos_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "tos_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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[1] "zeu_CESM-ETHZ_D_1_gr_1980-2018_v20210607.nc"
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Session information
sessionInfo()
R version 4.0.3 (2020-10-10)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: openSUSE Leap 15.2
Matrix products: default
BLAS: /usr/local/R-4.0.3/lib64/R/lib/libRblas.so
LAPACK: /usr/local/R-4.0.3/lib64/R/lib/libRlapack.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] units_0.6-7 tidync_0.2.4 stars_0.5-2 sf_0.9-8
[5] abind_1.4-5 metR_0.9.0 scico_1.2.0 patchwork_1.1.1
[9] collapse_1.5.0 forcats_0.5.0 stringr_1.4.0 dplyr_1.0.5
[13] purrr_0.3.4 readr_1.4.0 tidyr_1.1.2 tibble_3.0.4
[17] ggplot2_3.3.3 tidyverse_1.3.0 workflowr_1.6.2
loaded via a namespace (and not attached):
[1] fs_1.5.0 lubridate_1.7.9 httr_1.4.2
[4] rprojroot_2.0.2 tools_4.0.3 backports_1.1.10
[7] R6_2.5.0 KernSmooth_2.23-17 DBI_1.1.0
[10] colorspace_1.4-1 withr_2.3.0 tidyselect_1.1.0
[13] compiler_4.0.3 git2r_0.27.1 cli_2.1.0
[16] rvest_0.3.6 RNetCDF_2.4-2 xml2_1.3.2
[19] labeling_0.4.2 scales_1.1.1 checkmate_2.0.0
[22] classInt_0.4-3 digest_0.6.27 rmarkdown_2.5
[25] pkgconfig_2.0.3 htmltools_0.5.0 dbplyr_1.4.4
[28] rlang_0.4.10 readxl_1.3.1 rstudioapi_0.11
[31] generics_0.0.2 farver_2.0.3 jsonlite_1.7.1
[34] magrittr_1.5 ncmeta_0.3.0 Matrix_1.2-18
[37] Rcpp_1.0.5 munsell_0.5.0 fansi_0.4.1
[40] lifecycle_1.0.0 stringi_1.5.3 whisker_0.4
[43] yaml_2.2.1 grid_4.0.3 blob_1.2.1
[46] parallel_4.0.3 promises_1.1.1 crayon_1.3.4
[49] lattice_0.20-41 haven_2.3.1 hms_0.5.3
[52] knitr_1.30 pillar_1.4.7 reprex_0.3.0
[55] glue_1.4.2 evaluate_0.14 RcppArmadillo_0.10.1.2.0
[58] data.table_1.13.2 modelr_0.1.8 vctrs_0.3.5
[61] httpuv_1.5.4 cellranger_1.1.0 gtable_0.3.0
[64] assertthat_0.2.1 xfun_0.18 lwgeom_0.2-5
[67] broom_0.7.5 RcppEigen_0.3.3.7.0 e1071_1.7-4
[70] later_1.1.0.1 class_7.3-17 ncdf4_1.17
[73] viridisLite_0.3.0 ellipsis_0.3.1