Last updated: 2019-02-28

Checks: 2 0

Knit directory: drift-workflow/analysis/

This reproducible R Markdown analysis was created with workflowr (version 1.2.0). The Report tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: 3b61a0d

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility. The version displayed above was the version of the Git repository at the time these results were generated.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated: 


Ignored files:
    Ignored:    .Rhistory
    Ignored:    analysis/.Rhistory
    Ignored:    analysis/flash_cache/
    Ignored:    data/datasets/
    Ignored:    data/raw/
    Ignored:    output.tar.gz
    Ignored:    output/admixture/
    Ignored:    output/flash_greedy/
    Ignored:    output/log/
    Ignored:    output/sim/

Untracked files:
    Untracked:  data.tar.gz

Unstaged changes:
    Modified:   analysis/flash.Rmd
    Modified:   analysis/hoa_global.Rmd
    Modified:   code/viz.R
    Modified:   data/meta/HumanOriginsPublic2068.meta
    Modified:   data/meta/write_meta_HumanOriginsPublic2068.R

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the R Markdown and HTML files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view them.

File Version Author Date Message
html 38a461d jhmarcus 2019-02-24 built all
html 403bc6b jhmarcus 2019-02-15 added hide code blocks
html b4749ac jhmarcus 2019-02-15 fixed some typos
html 7a2b6c7 jhmarcus 2019-02-15 added backfit
html f5ef1af jhmarcus 2019-02-15 added workflows for human origins datasets
html 31a16c6 jhmarcus 2019-02-14 added hists of factors
html 9538510 jhmarcus 2019-02-13 switched to struct style plot
html 63c2b75 jhmarcus 2019-02-13 added softimpute
html 7b6ecbc jhmarcus 2019-02-12 made fig size bigger
html 5c0f91a jhmarcus 2019-02-12 init flash proof of principle
Rmd 46105ee jhmarcus 2019-02-11 Start workflowr project.

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