Last updated: 2026-03-26
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Knit directory: ~/Documents/GitHub/PAINT/
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| File | Version | Author | Date | Message |
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| Rmd | 49e06be | Lily Heald | 2026-03-26 | wflow_publish(c("analysis/index.Rmd", "analysis/cleaning.Rmd")) |
| Rmd | 2eacc85 | Lily Heald | 2026-02-16 | add pcas |
| html | 2eacc85 | Lily Heald | 2026-02-16 | add pcas |
| html | 836f7c0 | Lily Heald | 2026-02-10 | Update index data sources |
| Rmd | 69220b2 | Lily Heald | 2026-02-10 | Update index data sources |
| html | a3aacd7 | Lily Heald | 2025-11-07 | Build site. |
| html | c1708e0 | Lily Heald | 2025-11-06 | Build site. |
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| Rmd | 9007056 | Lily Heald | 2025-11-06 | Update index.Rmd |
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| Rmd | 2d86348 | Lily Heald | 2025-11-06 | Start workflowr project. |
This project explores the temporal and spatial distribution of pigmentation-related SNPs in the hominin lineage.
Background on the samples analyzed is available on the Introduction analysis page: - View UV map and aDNA sites
Population genetics analyses are available on the Analysis page: - View genetic PCAs
sessionInfo()R version 4.4.2 (2024-10-31)
Platform: aarch64-apple-darwin20
Running under: macOS 26.3.1
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: America/Detroit
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] workflowr_1.7.2
loaded via a namespace (and not attached):
[1] vctrs_0.7.1 httr_1.4.7 cli_3.6.5 knitr_1.51
[5] rlang_1.1.7 xfun_0.56 stringi_1.8.7 otel_0.2.0
[9] processx_3.8.6 promises_1.5.0 jsonlite_2.0.0 glue_1.8.0
[13] rprojroot_2.1.1 git2r_0.36.2 htmltools_0.5.9 httpuv_1.6.16
[17] ps_1.9.1 sass_0.4.10 rmarkdown_2.30 jquerylib_0.1.4
[21] tibble_3.3.1 evaluate_1.0.5 fastmap_1.2.0 yaml_2.3.12
[25] lifecycle_1.0.5 whisker_0.4.1 stringr_1.6.0 compiler_4.4.2
[29] fs_1.6.6 pkgconfig_2.0.3 Rcpp_1.1.1 rstudioapi_0.18.0
[33] later_1.4.5 digest_0.6.39 R6_2.6.1 pillar_1.11.1
[37] callr_3.7.6 magrittr_2.0.4 bslib_0.10.0 tools_4.4.2
[41] cachem_1.1.0 getPass_0.2-4