Last updated: 2020-12-18

Checks: 2 0

Knit directory: exp_evol_respiration/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version 263cd47. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .DS_Store
    Ignored:    .Rapp.history
    Ignored:    .Rproj.user/
    Ignored:    analysis/.DS_Store
    Ignored:    output/.DS_Store

Untracked files:
    Untracked:  output/brms_SEM_respiration.rds
    Untracked:  output/metabolite_interaction_plot.pdf
    Untracked:  output/metabolite_pairs_plot.pdf
    Untracked:  output/metabolite_plot.pdf
    Untracked:  output/respiration_figure.pdf
    Untracked:  output/respiration_pairs_plot.pdf
    Untracked:  post_preds_respiration.rds

Unstaged changes:
    Modified:   analysis/_site.yml
    Modified:   analysis/about.Rmd
    Modified:   analysis/metabolites.Rmd
    Modified:   analysis/respirometry.Rmd
    Deleted:    output/Figure 2.pdf
    Deleted:    output/bayesian_R2_values.rds
    Deleted:    output/brms_SEM.rds
    Deleted:    output/pairs_plot.pdf

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.


These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
html 93d326d lukeholman 2020-12-18 Build site.
html 709e5fd lukeholman 2020-12-18 Build site.
Rmd c8feb2d lukeholman 2020-11-30 Same page with Martin
html c8feb2d lukeholman 2020-11-30 Same page with Martin
Rmd e2289bb lukeholman 2020-11-30 Tweaks
html e2289bb lukeholman 2020-11-30 Tweaks
Rmd 49f4e1f lukeholman 2020-11-30 tweak
Rmd 3fdbcb2 lukeholman 2020-11-30 Tweaks Nov 2020
html 3fdbcb2 lukeholman 2020-11-30 Tweaks Nov 2020
html 2a6a751 lukeholman 2020-03-02 Build site.
Rmd 12b5409 lukeholman 2020-03-02 update index
Rmd 2752352 lukeholman 2020-01-17 Almost reaedy
html 2752352 lukeholman 2020-01-17 Almost reaedy
Rmd 9decb09 Luke Holman 2019-07-03 Start workflowr project.

The following website details the statistical analysis for the forthcoming paper “TITLE HERE” by Garlovsky et al.

1. Juvenile development time

2. Desiccation and starvation resistance

3. Respirometry

4. Metabolites