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Last updated: 2023-02-10

Checks: 2 0

Knit directory: Cardiotoxicity/

This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: ea3f948

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version ea3f948. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .RData
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    data/.txt
    Ignored:    data/allgenes.txt
    Ignored:    data/backGL.txt
    Ignored:    data/data_outline.txt
    Ignored:    data/filenameonly.txt
    Ignored:    data/individualDRCfile.RDS
    Ignored:    data/mymatrix.RDS
    Ignored:    data/norm_LDH.csv
    Ignored:    data/norm_counts.csv
    Ignored:    data/response_cluster24h.csv
    Ignored:    data/sigVDA24.txt
    Ignored:    data/sigVDA3.txt
    Ignored:    data/sigVDX24.txt
    Ignored:    data/sigVDX3.txt
    Ignored:    data/sigVEP24.txt
    Ignored:    data/sigVEP3.txt
    Ignored:    data/sigVMT24.txt
    Ignored:    data/sigVMT3.txt
    Ignored:    data/sigVTR24.txt
    Ignored:    data/sigVTR3.txt

Untracked files:
    Untracked:  .RDataTmp
    Untracked:  firstvenn24h.png
    Untracked:  mcor.csv
    Untracked:  reneebasecode.R

Unstaged changes:
    Modified:   Cardiotoxicity.Rproj
    Modified:   code/Corrscripts.R
    Modified:   venn_code.R

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File	Version	Author	Date	Message
Rmd	accc241	reneeisnowhere	2023-02-10	updates for the week
html	f147cf9	reneeisnowhere	2023-02-01	Build site.
Rmd	90da9c1	reneeisnowhere	2023-01-31	update index
html	146a31a	reneeisnowhere	2023-01-20	Build site.
Rmd	b7eac76	reneeisnowhere	2023-01-20	updating GO
html	6c21cf8	reneeisnowhere	2023-01-20	Build site.
Rmd	443a9f3	reneeisnowhere	2023-01-20	adding in GO analysis
html	8107886	reneeisnowhere	2023-01-20	Build site.
html	0950d4f	reneeisnowhere	2023-01-13	Build site.
Rmd	f03a013	reneeisnowhere	2023-01-13	update the link
Rmd	cfc3e81	reneeisnowhere	2023-01-13	updating readme and index
html	7eccdb8	reneeisnowhere	2023-01-12	Build site.
Rmd	93c4409	reneeisnowhere	2023-01-12	try again
Rmd	ae8266e	reneeisnowhere	2023-01-12	updating the rmarkdown
html	df8a845	reneeisnowhere	2023-01-11	Build site.
Rmd	98fe131	reneeisnowhere	2023-01-11	wflow_publish(c("analysis/license.Rmd", "analysis/index.Rmd"))
Rmd	be977ac	reneeisnowhere	2023-01-10	testing interface
Rmd	48a3f62	reneeisnowhere	2023-01-10	attempting again
html	7c3d440	reneeisnowhere	2023-01-10	Build site.
html	0d9d258	reneeisnowhere	2023-01-09	Build site.
Rmd	3aa4631	reneeisnowhere	2023-01-09	Trial updates
html	9e0f8ee	reneeisnowhere	2023-01-09	Build site.
Rmd	3b61ad1	reneeisnowhere	2023-01-09	Start workflowr project.

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