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Last updated: 2024-09-06

Checks: 2 0

Knit directory: myproject/analysis/

This reproducible R Markdown analysis was created with workflowr (version 1.7.1). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

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R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: 9cfbfa1

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version 9cfbfa1. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:

Ignored files:
    Ignored:    .BidstackAds-b51a10b9/
    Ignored:    .RData
    Ignored:    .Rhistory
    Ignored:    .Trash/
    Ignored:    .android/
    Ignored:    Templates/
    Ignored:    Untitled Folder/
    Ignored:    ilifu/
    Ignored:    sql/

Untracked files:
    Untracked:   ⁨Library/
    Untracked:  .AliView/
    Untracked:  .CFUserTextEncoding
    Untracked:  .DS_Store
    Untracked:  .IdentityService/
    Untracked:  .R/
    Untracked:  .RDataTmp
    Untracked:  .Rapp.history
    Untracked:  .ServiceHub/
    Untracked:  .Xauthority
    Untracked:  .anaconda/
    Untracked:  .anyconnect
    Untracked:  .aspnet/
    Untracked:  .azcopy/
    Untracked:  .bash_history
    Untracked:  .bash_profile
    Untracked:  .bashrc
    Untracked:  .bidstack-device-id
    Untracked:  .cache/
    Untracked:  .cisco/
    Untracked:  .conda/
    Untracked:  .condarc
    Untracked:  .config/
    Untracked:  .continuum/
    Untracked:  .cups/
    Untracked:  .docker/
    Untracked:  .dotnet/
    Untracked:  .dropbox/
    Untracked:  .gitconfig
    Untracked:  .gitignore
    Untracked:  .globusonline/
    Untracked:  .gsutil/
    Untracked:  .idlerc/
    Untracked:  .ipynb_checkpoints/
    Untracked:  .ipython/
    Untracked:  .jupyter/
    Untracked:  .keras/
    Untracked:  .lesshst
    Untracked:  .local/
    Untracked:  .matplotlib/
    Untracked:  .mono/
    Untracked:  .nuget/
    Untracked:  .nuuid.ini
    Untracked:  .oracle_jre_usage/
    Untracked:  .pdfbox.cache
    Untracked:  .python_history
    Untracked:  .sqlite_history
    Untracked:  .ssh/
    Untracked:  .tcshrc
    Untracked:  .templateengine/
    Untracked:  .test.txt.swp
    Untracked:  .viminfo
    Untracked:  .vscode/
    Untracked:  .wget-hsts
    Untracked:  .wine/
    Untracked:  .wing101-9
    Untracked:  .xonshrc
    Untracked:  .zprofile
    Untracked:  .zprofile.pysave
    Untracked:  .zsh_history
    Untracked:  .zsh_sessions/
    Untracked:  .zshrc
    Untracked:  Applications (Parallels)/
    Untracked:  Applications/
    Untracked:  Chunk.R
    Untracked:  Desktop/
    Untracked:  Documents/
    Untracked:  Downloads/
    Untracked:  Dropbox/
    Untracked:  Library/
    Untracked:  Movies/
    Untracked:  Music/
    Untracked:  Parallels/
    Untracked:  Pedigree.R
    Untracked:  Pictures/
    Untracked:  PlayOnMac's virtual drives
    Untracked:  Projects/
    Untracked:  Public/
    Untracked:  Untitled.ipynb
    Untracked:  _TyranoGameData/
    Untracked:  anaconda3/
    Untracked:  annotation/
    Untracked:  bcftools-1.9.tar.bz2
    Untracked:  bcftools-1.9/
    Untracked:  clumping_EX.txt
    Untracked:  df.csv
    Untracked:  df_R_tut.csv
    Untracked:  eval "$(ssh-agent -s)"
    Untracked:  eval "$(ssh-agent -s)".pub
    Untracked:  gfortran-4.8.2-darwin13.tar.bz2
    Untracked:  gnomad.genomes.v3.1.1.sites.chr1.vcf.bgz
    Untracked:  myenv/
    Untracked:  text.txt
    Untracked:  venv/

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

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There are no past versions. Publish this analysis with wflow_publish() to start tracking its development.

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