Last updated: 2019-07-10
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Knit directory: 2019-feature-selection/
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| html | c238ce4 | pat-s | 2019-07-10 | Build site. |
| Rmd | e98cb01 | pat-s | 2019-07-10 | wflow_publish(knitr_in(“analysis/eval-performance.Rmd”), view = FALSE, |
| Rmd | 24e318f | pat-s | 2019-07-01 | update reports |
| Rmd | ca5c5bc | pat-s | 2019-06-28 | add eval-performance report |
Warning: Expected 2 pieces. Additional pieces discarded in 9 rows [6, 15,
24, 35, 44, 53, 64, 73, 82].Warning: Expected 2 pieces. Missing pieces filled with `NA` in 15 rows [1,
10, 19, 28, 29, 30, 39, 48, 57, 58, 59, 68, 77, 86, 87].| learner_group | task.id | filter | best |
|---|---|---|---|
| SVM | VI | PCA | 1.822990e+00 |
| SVM | VI | CMIM | 1.828968e+00 |
| SVM | VI | Relief | 1.829052e+00 |
| SVM | VI | Info | 1.832112e+00 |
| SVM | HR | Pearson | 1.835110e+00 |
| SVM | VI | No Filter | 1.837101e+00 |
| SVM | HR | No Filter | 1.837101e+00 |
| SVM | NRI | CMIM | 1.837772e+00 |
| SVM | HR | Borda | 1.838642e+00 |
| SVM | NRI | PCA | 1.839763e+00 |
| SVM | HR | CMIM | 1.839929e+00 |
| SVM | HR | MRMR | 1.839938e+00 |
| SVM | HR | Car | 1.840133e+00 |
| SVM | VI | Pearson | 1.841647e+00 |
| SVM | HR | Info | 1.845974e+00 |
| SVM | NRI | No Filter | 1.862812e+00 |
| SVM | NRI | Car | 1.864166e+00 |
| SVM | NRI | Relief | 1.864614e+00 |
| SVM | NRI | MRMR | 1.870250e+00 |
| SVM | HR | PCA | 1.870688e+00 |
| SVM | VI | Borda | 1.872476e+00 |
| SVM | NRI | Pearson | 1.879307e+00 |
| SVM | HR | Relief | 1.894857e+00 |
| SVM | NRI | Info | 1.903714e+00 |
| SVM | VI | Car | 1.920964e+00 |
| SVM | VI | MRMR | 1.934234e+00 |
| SVM | NRI | Borda | 1.976663e+00 |
| RIDGE | NRI | No Filter | 2.116192e+00 |
| XG | HR | Info | 2.141743e+00 |
| XG | HR | CMIM | 2.159212e+00 |
| XG | HR | MRMR | 2.163146e+00 |
| XG | HR | Car | 2.195092e+00 |
| RF | NRI | Borda | 2.260054e+00 |
| XG | NRI | MRMR | 2.284767e+00 |
| RF | NRI | Car | 2.288120e+00 |
| XG | NRI | Relief | 2.296078e+00 |
| XG | NRI | Car | 2.317280e+00 |
| XG | NRI | No Filter | 2.324032e+00 |
| XG | NRI | Info | 2.353680e+00 |
| XG | VI | Borda | 2.357035e+00 |
| XG | NRI | CMIM | 2.359601e+00 |
| RIDGE | HR | No Filter | 2.362227e+00 |
| RF | NRI | Info | 2.383427e+00 |
| XG | HR | PCA | 2.387424e+00 |
| XG | VI | Relief | 2.409191e+00 |
| RF | HR | Info | 2.423537e+00 |
| XG | VI | PCA | 2.435016e+00 |
| RF | NRI | Pearson | 2.454691e+00 |
| RF | NRI | MRMR | 2.476900e+00 |
| RF | HR | Borda | 2.477372e+00 |
| XG | NRI | PCA | 2.479044e+00 |
| RF | VI | Info | 2.479226e+00 |
| RF | NRI | PCA | 2.486899e+00 |
| XG | NRI | Pearson | 2.499908e+00 |
| RF | VI | CMIM | 2.505334e+00 |
| XG | VI | CMIM | 2.507646e+00 |
| RF | HR | PCA | 2.508722e+00 |
| RF | VI | MRMR | 2.512445e+00 |
| RF | VI | PCA | 2.534520e+00 |
| RF | HR | Relief | 2.550136e+00 |
| RF | HR | Pearson | 2.555868e+00 |
| RF | NRI | Relief | 2.557534e+00 |
| RF | NRI | CMIM | 2.563138e+00 |
| RF | NRI | No Filter | 2.568671e+00 |
| XG | HR | Borda | 2.570526e+00 |
| RF | VI | No Filter | 2.585326e+00 |
| RF | HR | Car | 2.588946e+00 |
| RF | VI | Borda | 2.594228e+00 |
| XG | VI | MRMR | 2.597668e+00 |
| RF | VI | Relief | 2.600838e+00 |
| XG | HR | Pearson | 2.614220e+00 |
| RF | HR | CMIM | 2.616294e+00 |
| RF | VI | Pearson | 2.616360e+00 |
| XG | VI | Pearson | 2.643068e+00 |
| XG | HR | Relief | 2.644360e+00 |
| XG | VI | Info | 2.644628e+00 |
| RF | VI | Car | 2.662560e+00 |
| RF | HR | MRMR | 2.664423e+00 |
| XG | HR | No Filter | 2.682939e+00 |
| XG | VI | No Filter | 2.690225e+00 |
| XG | VI | Car | 2.699897e+00 |
| XG | NRI | Borda | 2.768898e+00 |
| RF | HR | No Filter | 2.815297e+00 |
| LASSO | HR | No Filter | 3.145344e+00 |
| LASSO | NRI | No Filter | 3.283980e+00 |
| LASSO | VI | No Filter | 3.797710e+00 |
| RIDGE | VI | No Filter | 1.803087e+06 |
Warning: Expected 2 pieces. Additional pieces discarded in 9 rows [6, 15,
24, 35, 44, 53, 64, 73, 82].Warning: Expected 2 pieces. Missing pieces filled with `NA` in 15 rows [1,
10, 19, 28, 29, 30, 39, 48, 57, 58, 59, 68, 77, 86, 87].| task.id | learner.id | learner_group | filter | rmse.test.rmse |
|---|---|---|---|---|
| defoliation-all-plots-VI | SVM PCA | SVM | PCA | 1.822990 |
| defoliation-all-plots-NRI | RIDGE | RIDGE | No Filter | 2.116192 |
| defoliation-all-plots-HR | XG Info Gain | XG | Info | 2.141743 |
| defoliation-all-plots-NRI | RF Borda | RF | Borda | 2.260054 |
| defoliation-all-plots-HR | LASSO | LASSO | No Filter | 3.145344 |
Warning: Expected 1 pieces. Additional pieces discarded in 72 rows [2, 3,
4, 5, 6, 7, 8, 9, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21, 22, 23, ...].Warning: Removed 1 rows containing missing values (geom_point).Warning: Removed 1 rows containing missing values (geom_label_repel).
| Version | Author | Date |
|---|---|---|
| c238ce4 | pat-s | 2019-07-10 |
R version 3.5.2 (2018-12-20)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: CentOS Linux 7 (Core)
Matrix products: default
BLAS: /opt/R/3.5.2/lib64/R/lib/libRblas.so
LAPACK: /usr/lib64/libopenblaso-r0.3.3.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] ggpubr_0.1.6 ggsci_2.9 ggrepel_0.8.0 ggplot2_3.1.0
[5] dplyr_0.8.0.1 magrittr_1.5 mlr_2.14.0.9000 ParamHelpers_1.12
[9] tidyselect_0.2.5
loaded via a namespace (and not attached):
[1] storr_1.2.1 xfun_0.5 purrr_0.3.0
[4] splines_3.5.2 lattice_0.20-38 colorspace_1.4-0
[7] htmltools_0.3.6 yaml_2.2.0 survival_2.43-3
[10] rlang_0.3.4 R.oo_1.22.0 pillar_1.3.1
[13] glue_1.3.0 withr_2.1.2 R.utils_2.8.0
[16] plyr_1.8.4 stringr_1.4.0 munsell_0.5.0
[19] gtable_0.2.0 workflowr_1.4.0 R.methodsS3_1.7.1
[22] evaluate_0.13 labeling_0.3 knitr_1.23
[25] parallelMap_1.3 parallel_3.5.2 highr_0.7
[28] Rcpp_1.0.0 scales_1.0.0 backports_1.1.3
[31] checkmate_1.9.1 fs_1.2.6 fastmatch_1.1-0
[34] digest_0.6.18 stringi_1.3.1 BBmisc_1.11
[37] grid_3.5.2 rprojroot_1.3-2 cli_1.1.0
[40] tools_3.5.2 base64url_1.4 lazyeval_0.2.1
[43] tibble_2.0.1 crayon_1.3.4 whisker_0.3-2
[46] tidyr_0.8.2 pkgconfig_2.0.2 Matrix_1.2-15
[49] data.table_1.12.0 drake_7.4.0.9000 assertthat_0.2.0
[52] rmarkdown_1.13 R6_2.4.0 igraph_1.2.4
[55] git2r_0.24.0 compiler_3.5.2