Last updated: 2019-02-17

workflowr checks: (Click a bullet for more information)

• ✔ R Markdown file: up-to-date

  Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

• ✔ Repository version: 33e1acb

  Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility. The version displayed above was the version of the Git repository at the time these results were generated.
  
  Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:

  
  Ignored files:
      Ignored:    .Rhistory
      Ignored:    .Rproj.user/
  
  Untracked files:
      Untracked:  code/alldata_compiler.R
      Untracked:  code/contab_maker.R
      Untracked:  code/mut_excl_genes_datapoints.R
      Untracked:  code/mut_excl_genes_generator.R
      Untracked:  code/quadratic_solver.R
      Untracked:  code/simresults_generator.R
      Untracked:  code/tcga_skcm_data_parser.Rmd
      Untracked:  code/tcgadatasorter.R
      Untracked:  data/All_Data_V2.csv
      Untracked:  data/all_data.csv
      Untracked:  data/tcga_alk_expression/
      Untracked:  output/alkati_mtn_pval_fig2B.pdf
      Untracked:  output/alkati_skcm_exonimbalance.pdf
      Untracked:  output/skcm_alk_exon_expression.csv
  
  

  Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

Expand here to see past versions:

File	Version	Author	Date	Message
Rmd	33e1acb	haiderinam	2019-02-17	Published Analysis on ALK expression levels #3
html	dfdb600	haiderinam	2019-02-17	Build site.
html	0cad4ec	haiderinam	2019-02-16	Build site.
html	5d432fb	haiderinam	2019-02-11	Build site.
Rmd	4c89be3	haiderinam	2019-02-11	Publish the initial files for myproject
html	d46a9cb	haiderinam	2019-02-11	Build site.
Rmd	644865d	haiderinam	2019-02-11	Start workflowr project.

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Welcome to my research website. Click on this link to see my results. Click on this link to see my results on ALK-expression.

What’s in each directory: Data: contains data downloaded from internet Output: contains data that your code makes Analysis: contains your Rmarkdown files that are converted to PDFs Code: contains .R files that are functions that your Rmd files in the analysis folder goes off of

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This reproducible R Markdown analysis was created with workflowr 1.1.1

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