Last updated: 2018-11-02

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• ✔ R Markdown file: up-to-date

  Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

• ✔ Repository version: 20adbe0

  Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility. The version displayed above was the version of the Git repository at the time these results were generated.
  
  Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:

  
  Untracked files:
      Untracked:  plots/180504_alignment.pdf
  
  Unstaged changes:
      Modified:   plots/180504_pca_tsne.pdf
      Modified:   plots/supplementary_figures/sfig_180504_alignment-discardedcells.pdf
      Modified:   plots/supplementary_figures/sfig_180504_biweightplots.pdf
      Modified:   plots/supplementary_figures/sfig_180504_pcelbow.pdf
      Modified:   plots/supplementary_figures/sfig_180504_qcplots.pdf
  
  

  Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

Expand here to see past versions:

File	Version	Author	Date	Message
Rmd	20adbe0	PytrikFolkertsma	2018-11-02	wflow_publish(c(“analysis/index.Rmd”))
html	91f2c9c	PytrikFolkertsma	2018-11-02	Build site.
Rmd	f8fe591	PytrikFolkertsma	2018-11-02	wflow_publish(c(“analysis/index.Rmd”))
html	eaa7e4a	PytrikFolkertsma	2018-11-02	Build site.
Rmd	120215c	PytrikFolkertsma	2018-11-02	general analysis + alignment
html	d810265	PytrikFolkertsma	2018-10-31	Build site.
html	57c44d6	PytrikFolkertsma	2018-10-31	Build site.
html	1f7e0da	PytrikFolkertsma	2018-10-30	Build site.
html	3395a74	PytrikFolkertsma	2018-10-26	first commit
Rmd	cf98ea8	PytrikFolkertsma	2018-10-26	Start workflowr project.

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Notebooks for 180504 analysis:   1. General analysis   2. Alignment  

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This reproducible R Markdown analysis was created with workflowr 1.1.1

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