Last updated: 2019-01-01
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Ignored files:
Ignored: code/.ipynb_checkpoints/
Ignored: output/10x-180504
Ignored: output/10x-180504-aligned
Ignored: output/10x-180504-aligned-metageneplot
Ignored: output/10x-180504-beforeQC
Ignored: output/10x-180504-beforeqc
Ignored: output/10x-180504-cca-discardedcells
Ignored: output/10x-180504-ccregout
Ignored: output/10x-180504-ccregout-aligned
Ignored: output/10x-180504-ccregout-cca-discardedcells
Ignored: output/10x-180831
Ignored: output/10x-180831-T1T2T3
Ignored: output/10x-180831-T4T5
Ignored: output/10x-180831-beforeqc
Ignored: output/10x-180831-notcleaned
Ignored: output/monocle/
Untracked files:
Untracked: code/mixture_cluster_gsea.R
Untracked: tables/10x-180504-stressed-cells-analysis.txt
Untracked: tables/GSEA_mixture-cluster.txt
Untracked: tables/Revigo_input_mixture-cluster.txt
Untracked: tables/Revigo_mixture-cluster.csv
Untracked: tables/Revigo_mixture-cluster_cleaned.txt
Unstaged changes:
Modified: analysis/10x-180504-general-analysis.Rmd
Modified: analysis/10x-180831-general-analysis.Rmd
Modified: plots/180504_mixture.pdf
Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes. File | Version | Author | Date | Message |
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Rmd | 1ee9efb | PytrikFolkertsma | 2019-01-01 | updated notebooks |
html | 12351bf | PytrikFolkertsma | 2019-01-01 | Build site. |
Rmd | b88a9ba | PytrikFolkertsma | 2019-01-01 | wflow_publish(c(“analysis/10x-180504-monocle.Rmd”, “analysis/index.Rmd”)) |
Rmd | 3be3c3d | PytrikFolkertsma | 2018-12-12 | updates |
html | 092644e | PytrikFolkertsma | 2018-11-11 | Build site. |
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html | 0652285 | PytrikFolkertsma | 2018-11-08 | Build site. |
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html | 19d224c | PytrikFolkertsma | 2018-11-08 | Build site. |
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html | 072f174 | PytrikFolkertsma | 2018-11-08 | Build site. |
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html | 8c816d4 | PytrikFolkertsma | 2018-11-07 | Build site. |
html | 4b12f43 | PytrikFolkertsma | 2018-11-05 | Build site. |
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html | 9e51a0a | PytrikFolkertsma | 2018-11-02 | Build site. |
html | cc9ed00 | PytrikFolkertsma | 2018-11-02 | Build site. |
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html | 0eee1c4 | PytrikFolkertsma | 2018-11-02 | Build site. |
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html | 4f5e908 | PytrikFolkertsma | 2018-11-02 | Build site. |
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html | 2b95cbd | PytrikFolkertsma | 2018-11-02 | Build site. |
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html | d6ccbf9 | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | 5ef5a54 | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | 77f0cd0 | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | ad3b515 | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | b20b10d | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | 7f1e2a3 | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | a58d589 | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | 9faddbb | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | f378262 | PytrikFolkertsma | 2018-11-02 | Build site. |
html | 4d75489 | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | 032862e | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | ca069c3 | PytrikFolkertsma | 2018-11-02 | notebooks + index |
html | cb4228f | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | e39c768 | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | a4453ec | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | 52e9177 | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | b5866be | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | 42be16c | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | 17b0321 | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | 20adbe0 | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | 91f2c9c | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | f8fe591 | PytrikFolkertsma | 2018-11-02 | wflow_publish(c(“analysis/index.Rmd”)) |
html | eaa7e4a | PytrikFolkertsma | 2018-11-02 | Build site. |
Rmd | 120215c | PytrikFolkertsma | 2018-11-02 | general analysis + alignment |
html | d810265 | PytrikFolkertsma | 2018-10-31 | Build site. |
html | 57c44d6 | PytrikFolkertsma | 2018-10-31 | Build site. |
html | 1f7e0da | PytrikFolkertsma | 2018-10-30 | Build site. |
html | 3395a74 | PytrikFolkertsma | 2018-10-26 | first commit |
Rmd | cf98ea8 | PytrikFolkertsma | 2018-10-26 | Start workflowr project. |
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