Last updated: 2021-10-27

Checks: 2 0

Knit directory: Multispectral HCC/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


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    Ignored:    NMF_26ce5dfd0cab/
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    Modified:   analysis/tcga.Rmd

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These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
html 668b155 Jovan Tanevski 2021-10-27 Build site.
Rmd a56dc0c Jovan Tanevski 2021-10-27 remove beta-cat, add cores 3 and 4 clusters
html 68cbc32 Jovan Tanevski 2021-10-08 Build site.
Rmd db035f5 Jovan Tanevski 2021-10-08 add misty analysis on tumor hepatocytes
html c85e3e6 Jovan Tanevski 2021-09-17 Build site.
Rmd 825c1f2 Jovan Tanevski 2021-09-17 pilot run on 1% of hepatocytes from tumor cores
html e7709fe Jovan Tanevski 2021-08-03 Build site.
html a386eaa Jovan Tanevski 2021-07-28 Build site.
Rmd 9ab4acc Jovan Tanevski 2021-07-28 Build site.
html d73f586 Jovan Tanevski 2021-07-28 Build site.
html 0bfae68 Jovan Tanevski 2021-07-28 Build site.
html 5043687 Jovan Tanevski 2021-07-28 Build site.
Rmd 0e0c4d5 Jovan Tanevski 2021-07-28 add placeholder content
Rmd 4cd934b Jovan Tanevski 2021-07-28 Start workflowr project.

Analyses

Basic exploratory analysis of the TCGA data

Pilot analysis of data from hepatocytes from tumor cores (3 clusters)

Pilot analysis of data from hepatocytes from tumor cores (4 clusters)

MISTy analysis of data from hepatocytes from tumor cores