Last updated: 2021-03-18
Checks: 2 0
Knit directory: wildlife-haemoprotozoa/
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | d429fdd | siobhon-egan | 2021-03-18 | First publish |
| Rmd | 4999de0 | siobhon-egan | 2021-02-12 | Start workflowr project. |
This website documents my PhD project related to wildlife haemoprotozoa. In the spirit of reproducibility this project website is created that outlines analysis done for the following publication:
Egan et al. Uncovering sylvatic cylces of bacteria in Australian wildlife.
PhD Thesis 2021 (Chapter five)
This website is build with workflowr package and hosted on my github.
Raw Illumina MiSeq data is available at NCBI SRA project XXXXX
Nucleotide sequence data available on Genbank
Data used but not directly produced for this manuscript.
Nucleotide data for identification of ticks MW665133-MW665150
To build/view webiste locally wflow_build() and wflow_view()
Status of workflow wflow_status()
Publish website pages wflow_publish(c("analysis/index.Rmd", "analysis/first-analysis.Rmd"), "Add my first analysis")
Push website to github wflow_git_push()