Processing math: 100%

Last updated: 2019-10-14

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Results

MR.ASH vs penalized linear regression

This is for MR.ASH vs. penalized linear regression.

Our story is

  1. the MR.ASH’s shrinkage operator (from a normal mixture prior) is more flexible than other popular shrinkage operators, which is a parametric form of λ (and γ if exists).

  2. VEB can do better than cross validation.

Performance of methods – Ridge case

Result 1

Flexibility of convex/non-convex shrinkage operators (E-NET, SCAD, MCP, L0Learn) vs MR.ASH shrinkage operator.

Result 2

MR.ASH vs. all other methods.

This is to reproduce the results in the Experiment section. Throughout the studies, we will fix n=500.

The default setting is (1) The number of coefficients p=2000 (2) The number of nonzero coefficients s=20 (sparsity) (3) Design: IndepGauss (4) Signal shape for nonzero coefficients: SparseNormal (5) PVE: 0.5

We will change exactly one of the below and fix the rest.

p Sparsity Design PVE

Different p

Result 4

Sparsity

IndepGauss + SparseNormal, n=500, p=2000 and s=1,5,20,100,500,2000.

Result 5

Different PVE

Different Design

LowdimIndepGauss + SuBogdanCandes

Result 7

RealGenotype

  1. Result 8