Last updated: 2020-10-27
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Knit directory: local_adaptation_sequence/
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | d68eb9b | Troy Rowan | 2020-10-27 | updated home page with links for SIM analysis |
| html | 37898e1 | Troy Rowan | 2020-10-12 | Build site. |
| Rmd | 46c1a8e | Troy Rowan | 2020-10-12 | updated home page |
| html | 002c12a | Troy Rowan | 2020-09-25 | Build site. |
| Rmd | ea37297 | Troy Rowan | 2020-09-25 | wflow_publish(files = c(“analysis/index.Rmd”)) |
| html | f05d5af | Troy Rowan | 2020-09-25 | Build site. |
| Rmd | e98b14b | Troy Rowan | 2020-09-25 | wflow_publish(files = c(“analysis/index.Rmd”)) |
| html | a660a62 | Troy Rowan | 2020-08-31 | Build site. |
| Rmd | 222e47b | Troy Rowan | 2020-08-31 | cleaned up tables and removed K=10 from animal locations file |
| html | 842647f | Troy Rowan | 2020-07-28 | Build site. |
| Rmd | 985e2dc | Troy Rowan | 2020-07-28 | Added link to imputation pipeline |
| html | 0d5dcc7 | Troy Rowan | 2020-07-14 | Build site. |
| Rmd | 574abae | Troy Rowan | 2020-07-14 | Changed Home page words and layout |
| html | d64c6ee | Troy Rowan | 2020-07-10 | Build site. |
| Rmd | 897d00b | Troy Rowan | 2020-07-10 | Fixed link |
| html | 6648c8a | Troy Rowan | 2020-07-10 | Build site. |
| Rmd | 9622906 | Troy Rowan | 2020-07-10 | Added link to maps example |
| html | d2da211 | Troy Rowan | 2020-07-10 | Build site. |
| Rmd | c205415 | Troy Rowan | 2020-07-10 | Extensive reworking to make initial website with maps example |
| html | 3b2afd7 | Troy Rowan | 2020-07-09 | Build site. |
| Rmd | 1fa1af8 | Troy Rowan | 2020-07-09 | Start workflowr project. |
Welcome to the Local Adaptation Sequence-Level Analysis Project Site
Imputation: GitHub page for our sequence-level imputation pipeline
Map Making: This describes how we used long-term climate data to break the United States into distinct ecoregions.
Simmental Locations: Here we see the geographic distribution of our genotyped Simmental population
GPSM Phenotypes: This is an exploration of various generation proxy phenotypes and possible transformations to make them more normal for use in LMMs
Red Angus GPSM Results: Results from GREML and LMM analysis of various transformed generation proxies in Red Angus dataset.
Simmental GPSM Results: Results from 811K analysis of Simmental dataset using various subsets of the simmental data. GREML estimates and GPSM results/