Last updated: 2021-08-09

Checks: 2 0

Knit directory: IITA_2021GS/

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The results in this page were generated with repository version 6f2057f. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

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Ignored files:
    Ignored:    .DS_Store
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    analysis/.DS_Store
    Ignored:    data/.DS_Store
    Ignored:    output/.DS_Store

Untracked files:
    Untracked:  IITA_2021GS.Rproj
    Untracked:  code/convertDart2vcf.R
    Untracked:  code/imputationFunctions.R
    Untracked:  data/DatabaseDownload_2021Aug08/
    Untracked:  data/DatabaseDownload_2021May04/
    Untracked:  data/GBSdataMasterList_31818.csv
    Untracked:  data/IITA_GBStoPhenoMaster_33018.csv
    Untracked:  data/NRCRI_GBStoPhenoMaster_40318.csv
    Untracked:  data/PedigreeGeneticGainCycleTime_aafolabi_01122020.xls
    Untracked:  data/Report-DCas21-6038/
    Untracked:  data/chr1_RefPanelAndGSprogeny_ReadyForGP_72719.fam
    Untracked:  output/IITA_CleanedTrialData_2021Aug08.rds
    Untracked:  output/IITA_trials_NOT_identifiable.csv
    Untracked:  output/maxNOHAV_byStudy.csv

Unstaged changes:
    Modified:   analysis/05-CrossValidation.Rmd
    Modified:   analysis/06-GenomicPredictions.Rmd
    Modified:   analysis/07-Results.Rmd
    Deleted:    analysis/inputsForSimulation.Rmd
    Deleted:    implementGMSinCassava.Rproj
    Deleted:    output/README.md
    Deleted:    output/cvAD_5rep5fold_predAccuracy.rds
    Deleted:    output/cvDirDom_5rep5fold_predAccuracy.rds
    Deleted:    output/estimateSelectionError.rds

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These are the previous versions of the repository in which changes were made to the R Markdown (analysis/license.Rmd) and HTML (docs/license.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
Rmd 8a0c50e wolfemd 2021-05-04 Start workflowr project.

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