License

Last updated: 2020-03-08

Checks: 2 0

Knit directory: rss-peca/

This reproducible R Markdown analysis was created with workflowr (version 1.6.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: e34126a

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility. The version displayed above was the version of the Git repository at the time these results were generated.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/

Unstaged changes:
    Modified:   analysis/af2017_gene.Rmd
    Modified:   analysis/bmi2015_gene.Rmd
    Modified:   analysis/cad2015_gene.Rmd
    Modified:   analysis/cd2015_gene.Rmd
    Modified:   analysis/gameon2012_gene.Rmd
    Modified:   analysis/hdl2010_gene.Rmd
    Modified:   analysis/height2014_gene.Rmd
    Modified:   analysis/hr2013_gene.Rmd
    Modified:   analysis/ibd2015_gene.Rmd
    Modified:   analysis/ldl2010_gene.Rmd
    Modified:   analysis/load2013_gene.Rmd
    Modified:   analysis/mi2015_gene.Rmd
    Modified:   analysis/neu2016_gene.Rmd
    Modified:   analysis/ra2014_gene.Rmd
    Modified:   analysis/scz2014_gene.Rmd
    Modified:   analysis/t2d2012_gene.Rmd
    Modified:   analysis/uc2015_gene.Rmd
    Modified:   analysis/waist2015_gene.Rmd

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the R Markdown and HTML files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view them.

File	Version	Author	Date	Message
Rmd	e34126a	xiangzhu	2020-03-08	wflow_publish(“analysis/license.Rmd”)
html	8fde153	xiangzhu	2020-02-06	Build site.
html	8209433	xiangzhu	2020-01-30	Build site.
html	23bbc44	xiangzhu	2019-08-17	Build site.
Rmd	11e8630	xiangzhu	2019-08-17	wflow_publish(“analysis/license.Rmd”)
html	889612b	Xiang Zhu	2018-07-19	Build site.
html	fcdb217	Xiang Zhu	2018-07-19	Build site.
Rmd	041a3ef	Xiang Zhu	2018-07-19	wflow_publish(files = c(“analysis/index.Rmd”, “analysis/license.Rmd”))
Rmd	c07849b	Xiang Zhu	2018-07-19	Start workflowr project.

Currently the online notebook is licensed under the Creative Commons Attribution-NoDerivatives 4.0 International License (CC BY-ND 4.0). This means you are free to include content from this site in your presentation, blog, or social media posts, as long you cite it. The “no derivatives” (ND) clause means you cannot modify the results and distribute them. Once the results are published, I will remove the ND clause.

If you use any results from this notebook, please explicitly acknowledge that the results are retrieved from https://github.com/xiangzhu/rss-peca, cite the following research article: