Last updated: 2019-04-24

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      Modified:   analysis/SuSiErssNotConverge.Rmd
      Modified:   analysis/SusieZPerformance.Rmd
      Modified:   analysis/SusieZPerformanceRE3.Rmd
      Modified:   output/dsc_susie_z_v_output.rds
  
  

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Rmd	c915005	zouyuxin	2019-01-15	Start workflowr project.

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Welcome to my research website.

• DSC query code

• SuSiE z convergence

• SuSiE z Problem

• Problem 75

• Problem 475

• SuSiE estimate prior variance comparison

• SuSiE z comparisons R full rank

SuSiE z vs DAP Power in one data set

• SuSiE z comparisons R singular

  Problem 42

  SuSiE z comparisons R singular with truncated eigenvalues

  Problem 92

• SuSiE Robust

• SuSiE z investigation:

  log Bays Factor

  Investigate

  Doesn’t stop problem

• Comparing result from in-sample R vs out-sample R:

  Equal effect size

  NON-Equal effect size

  Calibrated PIP and ROC for FINEMAP

  Calibrated PIP and ROC for SuSiE b (equal effect size)

  Calibrated PIP and ROC for SuSiE rss (equal effect size)

  • Problem data:

    SuSiE bhat out sample R error

    SuSiE RSS not converge

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  More investigations (2019-04-25): we include another estimation of correlation matrix cov2cor(\(X'X + zz'\))

  Power, FDR for SuSiE related methods

  Calibrated PIP and ROC for FINEMAP

  Calibrated PIP and ROC for SuSiE

  Calibrated PIP and ROC for SuSiE b

  Calibrated PIP and ROC for SuSiE rss

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