Last updated: 2021-09-21

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Rmd 2136a33 Robert 2021-08-17 Addressed the issue of sub-daily data
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Overview

This document contains a summary of the data products produced for WP1 of the FACE-IT project. These data are available to all FACE-IT members via password protected pCloud access. These data are also used in the meta-analysis review of the key drivers of change to arctic fjord ecosystems, which is a 24 month (October, 2022) deliverable.

Svalbard

Kongsfjorden

High level summary of data available for Kongsfjorden.

__Figure 1:__ High level overview of the data available for Kongsfjorden. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are no social data for Kongsfjorden). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Figure 1: High level overview of the data available for Kongsfjorden. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are no social data for Kongsfjorden). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Version Author Date
1caac63 Robert 2021-09-15
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25
0edbfc5 Robert 2021-08-24

Monthly average values for temperature and salinity data. These are taken as illustrative figures for the data that are likely available per month as they are generally the two most highly sampled variables in marine science.

__Figure 2:__ Monthly climatologies for data at Kongsfjorden. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Kongsfjorden. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Kongsfjorden. Note the much higher salinity for February and how most of the values are much lower than would be assumed. Probably due to a different sort of salinity calculation being used. D) Spatial surface (0 to 10 m) salinity climatologies.

Figure 2: Monthly climatologies for data at Kongsfjorden. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Kongsfjorden. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Kongsfjorden. Note the much higher salinity for February and how most of the values are much lower than would be assumed. Probably due to a different sort of salinity calculation being used. D) Spatial surface (0 to 10 m) salinity climatologies.

Version Author Date
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25
0edbfc5 Robert 2021-08-24

Trends in temperature and salinity data.

__Figure 3:__ Trends in A) temperature and B) salinity at different depth groups. The average annual values for all data are shown as diamonds, and the annual trends for these values are shown as coloured lines. There also appear to be two different types of salinity measurements. A long record of values close to 20 and a more recent addition of higher values around 32-35. One assumes that the lower values are measures of runoff and not proper ocean water.

Figure 3: Trends in A) temperature and B) salinity at different depth groups. The average annual values for all data are shown as diamonds, and the annual trends for these values are shown as coloured lines. There also appear to be two different types of salinity measurements. A long record of values close to 20 and a more recent addition of higher values around 32-35. One assumes that the lower values are measures of runoff and not proper ocean water.

Version Author Date
1caac63 Robert 2021-09-15
b4d9162 Robert 2021-08-25
0edbfc5 Robert 2021-08-24

Isfjorden

High level summary of data available for Isfjorden.

__Figure 4:__ High level overview of the data available for Isfjorden. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are no social data for Isfjorden). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. Note that there are some important moorings outside of this bounding box that _are_ included in the data counts. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Figure 4: High level overview of the data available for Isfjorden. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are no social data for Isfjorden). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. Note that there are some important moorings outside of this bounding box that are included in the data counts. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Version Author Date
1caac63 Robert 2021-09-15
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Monthly average values for temperature and salinity data.

__Figure 5:__ Monthly climatologies for data at Isfjorden. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Isfjorden. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Isfjorden. D) Spatial surface (0 to 10 m) salinity climatologies. Note that there are no surface salinity values for Isfjorden within the bounding box.

Figure 5: Monthly climatologies for data at Isfjorden. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Isfjorden. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Isfjorden. D) Spatial surface (0 to 10 m) salinity climatologies. Note that there are no surface salinity values for Isfjorden within the bounding box.

Version Author Date
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Trends in temperature and salinity data.

__Figure 6:__ Trends in A) temperature and B) salinity at different depth groups. The average annual values for all data are shown as diamonds, and the annual trends for these values are shown as coloured lines. Note that there are not currently many salinity data points for Isfjorden.

Figure 6: Trends in A) temperature and B) salinity at different depth groups. The average annual values for all data are shown as diamonds, and the annual trends for these values are shown as coloured lines. Note that there are not currently many salinity data points for Isfjorden.

Version Author Date
1caac63 Robert 2021-09-15
b4d9162 Robert 2021-08-25

Inglefieldbukta

High level summary of data available for Inglefieldbukta.

__Figure 7:__ High level overview of the data available for Inglefieldbukta. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are only physical data for Inglefieldbukta). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. Note that there are only two pixels because there are almost no data. C) Temporal summary of available data. D) Summmary of data available by depth (blank because there are no depth data). Note that all of the data summaries are log10 transformed.

Figure 7: High level overview of the data available for Inglefieldbukta. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are only physical data for Inglefieldbukta). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. Note that there are only two pixels because there are almost no data. C) Temporal summary of available data. D) Summmary of data available by depth (blank because there are no depth data). Note that all of the data summaries are log10 transformed.

Version Author Date
1caac63 Robert 2021-09-15
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Monthly average values for temperature and salinity data.

__Figure 8:__ Not enough data exist to calculate climatologies.

Figure 8: Not enough data exist to calculate climatologies.

Version Author Date
b4d9162 Robert 2021-08-25

Trends in temperature and salinity data.

__Figure 9:__ Not enough data exist to calculate trends.

Figure 9: Not enough data exist to calculate trends.

Version Author Date
b4d9162 Robert 2021-08-25

Greenland

Young Sound

High level summary of data available for Young Sound.

__Figure 10:__ High level overview of the data available for Young Sound. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are only cryo and phys data for Young Sound). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Figure 10: High level overview of the data available for Young Sound. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are only cryo and phys data for Young Sound). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Version Author Date
1caac63 Robert 2021-09-15
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Monthly average values for temperature and salinity data.

__Figure 11:__ Not enough data exist to calculate trends.

Figure 11: Not enough data exist to calculate trends.

Version Author Date
b4d9162 Robert 2021-08-25

Trends in temperature and salinity data.

__Figure 12:__ Not enough data exist to calculate trends.

Figure 12: Not enough data exist to calculate trends.

Version Author Date
b4d9162 Robert 2021-08-25

Disko Bay

High level summary of data available for Disko Bay.

__Figure 13:__ High level overview of the data available for Disko Bay. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are no bio or soc data for Disko Bay). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~10 km grouping. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Figure 13: High level overview of the data available for Disko Bay. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently there are no bio or soc data for Disko Bay). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~10 km grouping. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Version Author Date
1caac63 Robert 2021-09-15
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Monthly average values for temperature and salinity data.

__Figure 14:__ Monthly climatologies for data at Disko Bay. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Disko Bay. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Disko Bay. D) Spatial surface (0 to 10 m) salinity climatologies. Note that there are no salinity values for Disko Bay and almost no temperature values.

Figure 14: Monthly climatologies for data at Disko Bay. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Disko Bay. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Disko Bay. D) Spatial surface (0 to 10 m) salinity climatologies. Note that there are no salinity values for Disko Bay and almost no temperature values.

Version Author Date
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Trends in temperature and salinity data.

__Figure 15:__ Not enough data exist to calculate trends.

Figure 15: Not enough data exist to calculate trends.

Version Author Date
b4d9162 Robert 2021-08-25

Nuup Kangerlua

High level summary of data available for Nuup Kangerlua.

__Figure 16:__ High level overview of the data available for Nuup Kangerlua. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently only chem and phys data are available). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. Note how almost all of the data are from outside of the fjord. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Figure 16: High level overview of the data available for Nuup Kangerlua. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently only chem and phys data are available). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~1 km grouping. Note how almost all of the data are from outside of the fjord. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Version Author Date
1caac63 Robert 2021-09-15
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Monthly average values for temperature and salinity data.

__Figure 17:__ Monthly climatologies for data at Nuup Kangerlua. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Nuup Kangerlua. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Nuup Kangerlua. D) Spatial surface (0 to 10 m) salinity climatologies. Note that there are no salinity values for Nuup Kangerlua and sparse temperature values.

Figure 17: Monthly climatologies for data at Nuup Kangerlua. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Nuup Kangerlua. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Nuup Kangerlua. D) Spatial surface (0 to 10 m) salinity climatologies. Note that there are no salinity values for Nuup Kangerlua and sparse temperature values.

Version Author Date
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Trends in temperature and salinity data.

__Figure 18:__ Trends in A) temperature and B) salinity at different depth groups. The average annual values for all data are shown as diamonds, and the annual trends for these values are shown as coloured lines. Note that there are no salinity data.

Figure 18: Trends in A) temperature and B) salinity at different depth groups. The average annual values for all data are shown as diamonds, and the annual trends for these values are shown as coloured lines. Note that there are no salinity data.

Version Author Date
1caac63 Robert 2021-09-15
b4d9162 Robert 2021-08-25

Norway

Porsangerfjorden

High level summary of data available for Porsangerfjorden.

__Figure 19:__ High level overview of the data available for Porsangerfjorden. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently only chem and phys data are available). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~10 km grouping. Note how a lot of data are from outside of the fjord. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Figure 19: High level overview of the data available for Porsangerfjorden. The acronyms for the variable groups seen throughout the figure are: bio = biology, chem = chemistry, cryo = cryosphere, phys = physical, soc = social (currently only chem and phys data are available). A) Metadata showing the range of values available within the data. B) Spatial summary of data available per ~10 km grouping. Note how a lot of data are from outside of the fjord. C) Temporal summary of available data. D) Summmary of data available by depth. Note that all of the data summaries are log10 transformed. For C) and D) the log10 transformation is applied before the data are stacked by category, which gives the impression that there are much more data are than there are.

Version Author Date
1caac63 Robert 2021-09-15
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Monthly average values for temperature and salinity data.

__Figure 20:__ Monthly climatologies for data at Porsangerfjorden. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Porsangerfjorden. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Porsangerfjorden. D) Spatial surface (0 to 10 m) salinity climatologies. Note that there are no surface salinity values for Porsangerfjorden and the salinity values are questionable.

Figure 20: Monthly climatologies for data at Porsangerfjorden. The entire range of data was used for the climatology period. A) Temperature climatolgies at depths for all of Porsangerfjorden. B) Spatial surface (0 to 10 m) temperature climatologies. C) Salinity climatologies at depth for all of Porsangerfjorden. D) Spatial surface (0 to 10 m) salinity climatologies. Note that there are no surface salinity values for Porsangerfjorden and the salinity values are questionable.

Version Author Date
1caac63 Robert 2021-09-15
dd71077 Robert 2021-09-07
b4d9162 Robert 2021-08-25

Trends in temperature and salinity data.

__Figure 21:__ Trends in A) temperature and B) salinity at different depth groups. The average annual values for all data are shown as diamonds, and the annual trends for these values are shown as coloured lines. Note that there are not enough salinity data to calculate trends.

Figure 21: Trends in A) temperature and B) salinity at different depth groups. The average annual values for all data are shown as diamonds, and the annual trends for these values are shown as coloured lines. Note that there are not enough salinity data to calculate trends.

Version Author Date
1caac63 Robert 2021-09-15
b4d9162 Robert 2021-08-25

References


R version 4.1.1 (2021-08-10)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.6 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1

locale:
 [1] LC_CTYPE=en_GB.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=fr_FR.UTF-8        LC_COLLATE=en_GB.UTF-8    
 [5] LC_MONETARY=fr_FR.UTF-8    LC_MESSAGES=en_GB.UTF-8   
 [7] LC_PAPER=fr_FR.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=fr_FR.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] parallel  grid      stats     graphics  grDevices utils     datasets 
[8] methods   base     

other attached packages:
 [1] doParallel_1.0.16  iterators_1.0.13   foreach_1.5.1      pangaear_1.1.0    
 [5] sf_1.0-0           sp_1.4-5           RColorBrewer_1.1-2 ggOceanMaps_1.1.9 
 [9] ggspatial_1.1.5    gtable_0.3.0       gridExtra_2.3      PCICt_0.5-4.1     
[13] tidync_0.2.4       forcats_0.5.1      stringr_1.4.0      dplyr_1.0.6       
[17] purrr_0.3.4        readr_1.4.0        tidyr_1.1.3        tibble_3.1.2      
[21] ggplot2_3.3.3      tidyverse_1.3.1    workflowr_1.6.2   

loaded via a namespace (and not attached):
  [1] colorspace_2.0-1   ggsignif_0.6.2     ellipsis_0.3.2    
  [4] class_7.3-19       rio_0.5.26         rprojroot_2.0.2   
  [7] fs_1.5.0           rstudioapi_0.13    httpcode_0.3.0    
 [10] proxy_0.4-26       ggpubr_0.4.0       farver_2.1.0      
 [13] fansi_0.5.0        lubridate_1.7.10   xml2_1.3.2        
 [16] splines_4.1.1      codetools_0.2-18   ncdf4_1.17        
 [19] knitr_1.33         jsonlite_1.7.2     broom_0.7.7       
 [22] dbplyr_2.1.1       rgeos_0.5-5        oai_0.3.2         
 [25] hoardr_0.5.2       compiler_4.1.1     httr_1.4.2        
 [28] backports_1.2.1    Matrix_1.3-4       assertthat_0.2.1  
 [31] cli_2.5.0          later_1.2.0        htmltools_0.5.1.1 
 [34] tools_4.1.1        glue_1.4.2         rappdirs_0.3.3    
 [37] Rcpp_1.0.6         carData_3.0-4      cellranger_1.1.0  
 [40] jquerylib_0.1.4    RNetCDF_2.4-2      raster_3.4-10     
 [43] vctrs_0.3.8        crul_1.1.0         nlme_3.1-152      
 [46] xfun_0.23          ps_1.6.0           openxlsx_4.2.3    
 [49] rvest_1.0.0        lifecycle_1.0.0    ncmeta_0.3.0      
 [52] rstatix_0.7.0      scales_1.1.1       hms_1.1.0         
 [55] promises_1.2.0.1   yaml_2.2.1         curl_4.3.1        
 [58] sass_0.4.0         stringi_1.6.2      highr_0.9         
 [61] e1071_1.7-7        zip_2.2.0          rlang_0.4.11      
 [64] pkgconfig_2.0.3    evaluate_0.14      lattice_0.20-44   
 [67] labeling_0.4.2     cowplot_1.1.1      tidyselect_1.1.1  
 [70] processx_3.5.2     plyr_1.8.6         magrittr_2.0.1    
 [73] R6_2.5.0           generics_0.1.0     DBI_1.1.1         
 [76] mgcv_1.8-36        foreign_0.8-81     pillar_1.6.1      
 [79] haven_2.4.1        whisker_0.4        withr_2.4.2       
 [82] units_0.7-2        abind_1.4-5        modelr_0.1.8      
 [85] crayon_1.4.1       car_3.0-10         KernSmooth_2.23-20
 [88] utf8_1.2.1         rmarkdown_2.8      sfheaders_0.4.0   
 [91] readxl_1.3.1       data.table_1.14.0  callr_3.7.0       
 [94] git2r_0.28.0       reprex_2.0.0       digest_0.6.27     
 [97] classInt_0.4-3     httpuv_1.6.1       munsell_0.5.0     
[100] viridisLite_0.4.0  bslib_0.2.5.1