Corrplot
Last updated: 2022-11-30
Checks: 7 0
Knit directory:
ampel-leipzig-meld/
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| html | 65d58c4 | Sebastian Gibb | 2022-07-18 | chore: rebuild site |
| html | fb43d01 | Sebastian Gibb | 2022-06-19 | chore: rebuild site |
| html | ebe29cf | Sebastian Gibb | 2022-06-16 | chore: rebuild site |
| Rmd | b4c182d | Sebastian Gibb | 2022-06-15 | feat: add spearman correlation |
| Rmd | 3a8124e | Sebastian Gibb | 2022-06-15 | refactor: use zlog_data instead of imp_data |
| html | 8035219 | Sebastian Gibb | 2022-06-15 | chore: rebuild site |
| html | d3e9462 | Sebastian Gibb | 2022-06-06 | chore: rebuild site |
| html | b20484a | Sebastian Gibb | 2022-06-06 | chore: rebuild site |
| html | 983ec69 | Sebastian Gibb | 2022-03-17 | chore: rebuild site |
| Rmd | d38da01 | Sebastian Gibb | 2022-03-17 | feat: list correlations in table |
| html | 373e7d8 | Sebastian Gibb | 2021-10-20 | chore: rebuild site |
| html | df8964f | Sebastian Gibb | 2021-10-15 | chore: rebuild site |
| html | c66640c | Sebastian Gibb | 2021-09-14 | feat: first nnet tests |
| html | afa48d9 | Sebastian Gibb | 2021-08-07 | chore: rebuild site |
| Rmd | 4478f6a | Sebastian Gibb | 2021-08-02 | Revert "fix: working directory for targets" |
| Rmd | cac14f6 | Sebastian Gibb | 2021-08-02 | fix: working directory for targets |
| Rmd | 3957af7 | Sebastian Gibb | 2021-08-02 | refactor: move common yaml headers into _site.yml |
| html | 3aab3e1 | Sebastian Gibb | 2021-08-01 | chore: rebuild site |
| html | 3810a79 | Sebastian Gibb | 2021-07-15 | chore: rebuild site |
| html | 2869556 | Sebastian Gibb | 2021-07-02 | chore: rebuild site |
| html | d9c37ec | Sebastian Gibb | 2021-07-02 | chore: rebuild site |
| html | 81fcc75 | Sebastian Gibb | 2021-06-11 | chore: rebuild site |
| html | 783c49f | Sebastian Gibb | 2021-06-11 | chore: rebuild site |
| html | aac7ea8 | Sebastian Gibb | 2021-06-11 | chore: rebuild site |
| Rmd | ba5de74 | Sebastian Gibb | 2021-06-11 | fix: suppress package startup messages |
| html | 6541fae | Sebastian Gibb | 2021-06-11 | fix: add targets for missing/corrplot |
| Rmd | 5d77d52 | Sebastian Gibb | 2021-06-11 | fix: use imputed data for correlation |
| Rmd | 3e38f5a | Sebastian Gibb | 2021-06-11 | feat: add correlation plot |
library("corrplot")
library("targets")
tar_load(zlog_data)1 Correlation (pearson)
1.1 Plot
labv <- grep("_[SECQ]$", colnames(zlog_data), value = TRUE)
cr <- cor(zlog_data[labv], method = "pearson", use = "pairwise.complete.obs")
corrplot.mixed(
cr,
tl.pos = "lt", tl.col = "black", tl.cex = 0.75,
number.cex = 0.25, number.font = 1L,
order = "AOE"
)
1.2 Table
ut <- upper.tri(cr)
nms <- paste(
colnames(cr)[col(cr)[ut]],
rownames(cr)[row(cr)[ut]],
sep = ":"
)
tbl <- data.frame(Values = nms, Correlation = cr[ut])
tbl <- tbl[order(-abs(tbl$Correlation)),]
knitr::kable(tbl, header = TRUE, row.names = FALSE, digits = 3L)| Values | Correlation |
|---|---|
| BILID_S:BILI_S | 0.959 |
| CYSC_S:CRE_S | 0.801 |
| NA_S:CL_S | 0.764 |
| IL6_S:CRP_S | 0.750 |
| CA_S:ALB_S | 0.734 |
| INR_C:BILI_S | 0.712 |
| INR_C:BILID_S | 0.702 |
| PALB_S:CHE_S | 0.692 |
| ASAT_S:ALAT_S | 0.685 |
| IL6_S:CHE_S | -0.685 |
| IL6_S:ALB_S | -0.683 |
| CHE_S:ALB_S | 0.676 |
| PALB_S:ALB_S | 0.655 |
| CHE_S:CA_S | 0.654 |
| BILID_S:ALB_S | -0.644 |
| CHE_S:BILID_S | -0.639 |
| CHOLG_S:CHE_S | 0.630 |
| PALB_S:BILID_S | -0.624 |
| IL6_S:CYSC_S | 0.611 |
| GGT_S:AP_S | 0.610 |
| INR_C:CHOLG_S | -0.607 |
| IL6_S:BILID_S | 0.604 |
| PROT_S:ALB_S | 0.597 |
| PALB_S:CA_S | 0.593 |
| BILI_S:ALB_S | -0.587 |
| CHE_S:BILI_S | -0.586 |
| PALB_S:BILI_S | -0.586 |
| INR_C:IL6_S | 0.585 |
| PALB_S:IL6_S | -0.582 |
| IL6_S:BILI_S | 0.577 |
| INR_C:CHE_S | -0.574 |
| IL6_S:CHOLG_S | -0.574 |
| CRP_S:ALB_S | -0.565 |
| CRP_S:CHE_S | -0.558 |
| BILI_S:ASAT_S | 0.555 |
| BILID_S:ASAT_S | 0.554 |
| IL6_S:CA_S | -0.549 |
| INR_C:ALB_S | -0.546 |
| PROT_S:CA_S | 0.544 |
| PROT_S:CHOLG_S | 0.543 |
| PALB_S:INR_C | -0.542 |
| PROT_S:IL6_S | -0.540 |
| CA_S:BILID_S | -0.533 |
| PROT_S:BILI_S | -0.520 |
| PALB_S:CHOLG_S | 0.515 |
| PROT_S:BILID_S | -0.509 |
| PROT_S:INR_C | -0.507 |
| CRP_S:BILID_S | 0.507 |
| PROT_S:CHE_S | 0.493 |
| CYSC_S:CHE_S | -0.489 |
| CYSC_S:CRP_S | 0.485 |
| PALB_S:CRP_S | -0.483 |
| NA_S:CHE_S | 0.480 |
| CHOLG_S:BILI_S | -0.479 |
| CHOLG_S:CA_S | 0.474 |
| CA_S:BILI_S | -0.470 |
| CHOLG_S:BILID_S | -0.470 |
| CRP_S:BILI_S | 0.461 |
| CRP_S:CA_S | -0.459 |
| PTH_S:CRE_S | 0.457 |
| CYSC_S:ALB_S | -0.453 |
| CHOLG_S:ALB_S | 0.444 |
| INR_C:ASAT_S | 0.438 |
| INR_C:CA_S | -0.430 |
| PTH_S:CYSC_S | 0.425 |
| PALB_S:B_PLT_E | 0.420 |
| ASAT_S:ALB_S | -0.419 |
| INR_C:B_PLT_E | -0.394 |
| NA_S:ALB_S | 0.394 |
| BILID_S:B_PLT_E | -0.393 |
| CYSC_S:BILID_S | 0.392 |
| ASAT_S:AP_S | 0.391 |
| INR_C:CRP_S | 0.390 |
| BILI_S:B_PLT_E | -0.385 |
| IL6_S:CRE_S | 0.381 |
| CHOLG_S:B_PLT_E | 0.381 |
| VDT_OH_S:IL6_S | -0.373 |
| PROT_S:CYSC_S | -0.372 |
| CRP_S:CHOLG_S | -0.366 |
| PROT_S:CRP_S | -0.366 |
| CYSC_S:CHOLG_S | -0.365 |
| NA_S:IL6_S | -0.362 |
| IL6_S:ASAT_S | 0.358 |
| CYSC_S:BILI_S | 0.355 |
| INR_C:CYSC_S | 0.345 |
| VDT_OH_S:CHE_S | 0.343 |
| B_WBC_E:B_PLT_E | 0.341 |
| PROT_S:PALB_S | 0.338 |
| NA_S:CA_S | 0.337 |
| NA_S:BILID_S | -0.336 |
| CRP_S:ASAT_S | 0.336 |
| CRP_S:B_WBC_E | 0.331 |
| CA_S:B_PLT_E | 0.330 |
| CRP_S:AP_S | 0.326 |
| CHE_S:B_PLT_E | 0.320 |
| VDT_OH_S:CRP_S | -0.319 |
| NA_S:CRP_S | -0.317 |
| B_PLT_E:ALB_S | 0.317 |
| GGT_S:CHOLG_S | 0.316 |
| NA_S:BILI_S | -0.316 |
| VDT_OH_S:PALB_S | 0.311 |
| CYSC_S:CA_S | -0.306 |
| CRP_S:CRE_S | 0.305 |
| PROT_S:B_PLT_E | 0.304 |
| P_S:CRE_S | 0.304 |
| IL6_S:B_WBC_E | 0.298 |
| VDT_OH_S:CHOLG_S | 0.295 |
| VDT_OH_S:PTH_S | -0.294 |
| BILID_S:AP_S | 0.290 |
| CHE_S:ASAT_S | -0.289 |
| P_S:B_PLT_E | 0.288 |
| NA_S:INR_C | -0.284 |
| VDT_OH_S:CA_S | 0.284 |
| VDT_OH_S:CYSC_S | -0.284 |
| PROT_S:ASAT_S | -0.282 |
| B_PLT_E:B_MPV_E | -0.281 |
| PROT_S:CRE_S | -0.281 |
| VDT_OH_S:ALB_S | 0.279 |
| PALB_S:NA_S | 0.278 |
| PTH_S:PROT_S | -0.277 |
| VDT_OH_S:INR_C | -0.276 |
| PALB_S:ASAT_S | -0.276 |
| CRE_S:CHE_S | -0.273 |
| CRE_S:ALB_S | -0.273 |
| PTH_S:CA_S | -0.271 |
| AP_S:ALB_S | -0.267 |
| IL6_S:B_PLT_E | -0.266 |
| CL_S:B_WBC_E | -0.265 |
| AP_S:ALAT_S | 0.261 |
| PALB_S:CYSC_S | -0.260 |
| CA_S:ASAT_S | -0.260 |
| GGT_S:ASAT_S | 0.260 |
| VDT_OH_S:PROT_S | 0.259 |
| NA_S:CHOLG_S | 0.259 |
| GGT_S:ALAT_S | 0.254 |
| VDT_OH_S:BILID_S | -0.252 |
| VDT_OH_S:BILI_S | -0.249 |
| NA_S:B_WBC_E | -0.245 |
| CL_S:CHE_S | 0.244 |
| CRP_S:CL_S | -0.243 |
| BILI_S:ALAT_S | 0.240 |
| CRE_S:B_WBC_E | 0.238 |
| NA_S:CYSC_S | -0.236 |
| CYSC_S:B_WBC_E | 0.225 |
| B_WBC_E:ASAT_S | 0.225 |
| CRE_S:CHOLG_S | -0.224 |
| PTH_S:IL6_S | 0.219 |
| BILID_S:ALAT_S | 0.216 |
| IL6_S:CL_S | -0.214 |
| BILI_S:AP_S | 0.212 |
| GGT_S:CRP_S | 0.211 |
| PROT_S:B_WBC_E | -0.210 |
| GGT_S:B_PLT_E | 0.210 |
| P_S:CYSC_S | 0.202 |
| CL_S:B_MPV_E | 0.201 |
| CYSC_S:ASAT_S | 0.197 |
| CHE_S:AP_S | -0.197 |
| CHOLG_S:ASAT_S | -0.196 |
| CA_S:AP_S | -0.195 |
| CL_S:BILI_S | -0.194 |
| P_S:B_WBC_E | 0.193 |
| CRE_S:CA_S | -0.192 |
| NA_S:CRE_S | -0.189 |
| CL_S:BILID_S | -0.186 |
| VDT_OH_S:NA_S | 0.183 |
| INR_C:GGT_S | -0.179 |
| PTH_S:CRP_S | 0.178 |
| BILID_S:B_WBC_E | 0.177 |
| B_WBC_E:ALB_S | -0.172 |
| PALB_S:GGT_S | 0.170 |
| NA_S:B_MPV_E | 0.170 |
| NA_S:ASAT_S | -0.169 |
| PTH_S:CHOLG_S | -0.168 |
| BILI_S:B_WBC_E | 0.167 |
| VDT_OH_S:AP_S | -0.167 |
| NA_S:AP_S | -0.166 |
| PTH_S:B_WBC_E | 0.165 |
| VDT_OH_S:ASAT_S | -0.163 |
| VDT_OH_S:B_WBC_E | -0.163 |
| CYSC_S:AP_S | 0.160 |
| P_S:CL_S | -0.159 |
| INR_C:B_WBC_E | 0.158 |
| IL6_S:AP_S | 0.153 |
| CL_S:ALB_S | 0.153 |
| PROT_S:NA_S | 0.146 |
| PTH_S:CHE_S | -0.145 |
| P_S:NA_S | -0.144 |
| CYSC_S:B_PLT_E | -0.143 |
| CRE_S:BILID_S | 0.143 |
| P_S:INR_C | -0.141 |
| PALB_S:AP_S | -0.140 |
| B_WBC_E:ALAT_S | 0.137 |
| B_MPV_E:ALAT_S | 0.136 |
| PROT_S:GGT_S | 0.136 |
| B_PLT_E:ASAT_S | -0.134 |
| P_S:BILI_S | -0.133 |
| INR_C:CRE_S | 0.132 |
| PALB_S:P_S | 0.131 |
| INR_C:ALAT_S | 0.130 |
| B_PLT_E:AP_S | 0.128 |
| B_WBC_E:AP_S | 0.126 |
| PROT_S:ALAT_S | -0.125 |
| CHOLG_S:AP_S | 0.124 |
| INR_C:CL_S | -0.124 |
| GGT_S:B_WBC_E | 0.121 |
| P_S:CHOLG_S | 0.118 |
| CL_S:AP_S | -0.118 |
| VDT_OH_S:CRE_S | -0.116 |
| P_S:BILID_S | -0.114 |
| CL_S:ASAT_S | -0.114 |
| CRE_S:BILI_S | 0.111 |
| ALB_S:ALAT_S | -0.109 |
| CL_S:CA_S | 0.109 |
| CRP_S:ALAT_S | 0.106 |
| VDT_OH_S:CL_S | 0.106 |
| PTH_S:ALB_S | -0.105 |
| B_MPV_E:ASAT_S | 0.104 |
| PROT_S:P_S | 0.103 |
| CL_S:B_PLT_E | -0.098 |
| B_WBC_E:B_MPV_E | -0.095 |
| PTH_S:INR_C | 0.094 |
| CHE_S:B_WBC_E | -0.094 |
| P_S:CA_S | 0.093 |
| P_S:GGT_S | 0.092 |
| CYSC_S:CL_S | -0.091 |
| CRP_S:B_PLT_E | -0.091 |
| PTH_S:BILI_S | 0.090 |
| P_S:AP_S | 0.090 |
| PALB_S:CL_S | 0.090 |
| VDT_OH_S:B_MPV_E | 0.087 |
| CHOLG_S:B_WBC_E | -0.086 |
| PTH_S:BILID_S | 0.086 |
| PTH_S:GGT_S | 0.081 |
| PTH_S:ASAT_S | 0.081 |
| BILID_S:B_MPV_E | 0.077 |
| PTH_S:AP_S | 0.076 |
| CRP_S:B_MPV_E | -0.071 |
| CRE_S:CL_S | -0.070 |
| GGT_S:CL_S | -0.069 |
| VDT_OH_S:GGT_S | -0.068 |
| BILI_S:B_MPV_E | 0.065 |
| PALB_S:B_MPV_E | -0.065 |
| CYSC_S:ALAT_S | -0.064 |
| CRE_S:ALAT_S | -0.062 |
| IL6_S:B_MPV_E | -0.059 |
| CHE_S:B_MPV_E | 0.058 |
| CA_S:B_WBC_E | -0.057 |
| CL_S:CHOLG_S | 0.054 |
| GGT_S:B_MPV_E | 0.054 |
| CHE_S:ALAT_S | 0.053 |
| P_S:B_MPV_E | -0.051 |
| IL6_S:ALAT_S | 0.051 |
| VDT_OH_S:ALAT_S | 0.049 |
| CRE_S:ASAT_S | 0.049 |
| P_S:ALB_S | 0.046 |
| GGT_S:BILI_S | -0.043 |
| PALB_S:ALAT_S | 0.042 |
| PALB_S:B_WBC_E | 0.041 |
| GGT_S:CHE_S | 0.041 |
| NA_S:GGT_S | -0.041 |
| PALB_S:CRE_S | -0.041 |
| PTH_S:P_S | 0.039 |
| CA_S:B_MPV_E | 0.038 |
| PTH_S:B_MPV_E | -0.038 |
| B_MPV_E:AP_S | 0.038 |
| P_S:CRP_S | -0.036 |
| PROT_S:B_MPV_E | -0.035 |
| P_S:IL6_S | -0.034 |
| PROT_S:CL_S | -0.033 |
| PROT_S:AP_S | -0.033 |
| GGT_S:CYSC_S | 0.032 |
| PTH_S:ALAT_S | -0.031 |
| IL6_S:GGT_S | -0.031 |
| INR_C:AP_S | 0.028 |
| PTH_S:NA_S | -0.028 |
| CHOLG_S:ALAT_S | 0.027 |
| P_S:ALAT_S | -0.025 |
| NA_S:ALAT_S | -0.023 |
| NA_S:B_PLT_E | 0.023 |
| CA_S:ALAT_S | -0.023 |
| P_S:CHE_S | 0.022 |
| CHOLG_S:B_MPV_E | -0.022 |
| GGT_S:BILID_S | 0.021 |
| PTH_S:PALB_S | 0.021 |
| CRE_S:B_PLT_E | -0.021 |
| VDT_OH_S:P_S | -0.021 |
| PTH_S:CL_S | -0.020 |
| GGT_S:ALB_S | 0.019 |
| B_MPV_E:ALB_S | -0.016 |
| B_PLT_E:ALAT_S | -0.015 |
| CYSC_S:B_MPV_E | 0.014 |
| GGT_S:CRE_S | -0.012 |
| VDT_OH_S:B_PLT_E | 0.012 |
| CRE_S:AP_S | 0.012 |
| PTH_S:B_PLT_E | -0.010 |
| GGT_S:CA_S | 0.010 |
| P_S:ASAT_S | 0.009 |
| CL_S:ALAT_S | -0.007 |
| INR_C:B_MPV_E | -0.003 |
| CRE_S:B_MPV_E | 0.003 |
2 Correlation (spearman)
2.1 Plot
cr <- cor(zlog_data[labv], method = "spearman", use = "pairwise.complete.obs")
corrplot.mixed(
cr,
tl.pos = "lt", tl.col = "black", tl.cex = 0.75,
number.cex = 0.25, number.font = 1L,
order = "AOE"
)
| Version | Author | Date |
|---|---|---|
| ebe29cf | Sebastian Gibb | 2022-06-16 |
2.2 Table
ut <- upper.tri(cr)
nms <- paste(
colnames(cr)[col(cr)[ut]],
rownames(cr)[row(cr)[ut]],
sep = ":"
)
tbl <- data.frame(Values = nms, Correlation = cr[ut])
tbl <- tbl[order(-abs(tbl$Correlation)),]
knitr::kable(tbl, header = TRUE, row.names = FALSE, digits = 3L)| Values | Correlation |
|---|---|
| BILID_S:BILI_S | 0.963 |
| IL6_S:CRP_S | 0.770 |
| CHE_S:ALB_S | 0.763 |
| CA_S:ALB_S | 0.751 |
| CYSC_S:CRE_S | 0.751 |
| PALB_S:CHE_S | 0.747 |
| IL6_S:CHE_S | -0.734 |
| INR_C:BILID_S | 0.734 |
| INR_C:BILI_S | 0.729 |
| PALB_S:ALB_S | 0.725 |
| PALB_S:BILID_S | -0.698 |
| CHE_S:CA_S | 0.696 |
| IL6_S:ALB_S | -0.694 |
| CHE_S:BILID_S | -0.686 |
| BILID_S:ALB_S | -0.679 |
| PALB_S:INR_C | -0.673 |
| PALB_S:BILI_S | -0.652 |
| INR_C:CHE_S | -0.650 |
| PALB_S:CA_S | 0.636 |
| IL6_S:CYSC_S | 0.634 |
| NA_S:CL_S | 0.632 |
| ASAT_S:ALAT_S | 0.626 |
| CHE_S:BILI_S | -0.615 |
| PALB_S:IL6_S | -0.614 |
| BILI_S:ALB_S | -0.611 |
| INR_C:ALB_S | -0.599 |
| IL6_S:CA_S | -0.586 |
| CRP_S:ALB_S | -0.576 |
| IL6_S:BILID_S | 0.575 |
| CHOLG_S:CHE_S | 0.571 |
| CRP_S:CHE_S | -0.564 |
| CA_S:BILID_S | -0.563 |
| GGT_S:AP_S | 0.562 |
| INR_C:CHOLG_S | -0.553 |
| INR_C:IL6_S | 0.553 |
| BILID_S:ASAT_S | 0.548 |
| CYSC_S:CHE_S | -0.543 |
| INR_C:CA_S | -0.529 |
| IL6_S:BILI_S | 0.527 |
| PROT_S:CA_S | 0.525 |
| BILI_S:ASAT_S | 0.519 |
| PROT_S:ALB_S | 0.511 |
| PALB_S:CHOLG_S | 0.502 |
| CYSC_S:CRP_S | 0.499 |
| CA_S:BILI_S | -0.497 |
| CHOLG_S:CA_S | 0.492 |
| PALB_S:CRP_S | -0.490 |
| CRP_S:BILID_S | 0.486 |
| IL6_S:CHOLG_S | -0.479 |
| CYSC_S:ALB_S | -0.475 |
| CRP_S:CA_S | -0.460 |
| NA_S:CHE_S | 0.453 |
| PROT_S:CHE_S | 0.452 |
| ASAT_S:AP_S | 0.445 |
| CRP_S:BILI_S | 0.438 |
| NA_S:IL6_S | -0.431 |
| PROT_S:BILID_S | -0.426 |
| CHOLG_S:ALB_S | 0.422 |
| PALB_S:B_PLT_E | 0.421 |
| ASAT_S:ALB_S | -0.414 |
| PROT_S:BILI_S | -0.412 |
| BILID_S:B_PLT_E | -0.410 |
| INR_C:B_PLT_E | -0.409 |
| INR_C:CRP_S | 0.408 |
| PROT_S:CHOLG_S | 0.406 |
| B_WBC_E:B_PLT_E | 0.405 |
| BILI_S:B_PLT_E | -0.397 |
| CHOLG_S:BILID_S | -0.396 |
| PROT_S:IL6_S | -0.392 |
| VDT_OH_S:IL6_S | -0.385 |
| INR_C:ASAT_S | 0.384 |
| CYSC_S:BILID_S | 0.384 |
| CHOLG_S:BILI_S | -0.382 |
| PTH_S:CRE_S | 0.377 |
| NA_S:ALB_S | 0.368 |
| NA_S:CRP_S | -0.365 |
| CHE_S:ASAT_S | -0.361 |
| PROT_S:INR_C | -0.359 |
| PTH_S:CYSC_S | 0.352 |
| INR_C:CYSC_S | 0.349 |
| PALB_S:NA_S | 0.348 |
| IL6_S:CRE_S | 0.344 |
| PROT_S:PALB_S | 0.344 |
| CA_S:B_PLT_E | 0.340 |
| CHOLG_S:B_PLT_E | 0.339 |
| CRP_S:AP_S | 0.338 |
| CYSC_S:BILI_S | 0.337 |
| CHE_S:B_PLT_E | 0.337 |
| GGT_S:ASAT_S | 0.336 |
| CYSC_S:CA_S | -0.335 |
| CYSC_S:CHOLG_S | -0.330 |
| VDT_OH_S:CHE_S | 0.329 |
| NA_S:CYSC_S | -0.327 |
| NA_S:INR_C | -0.327 |
| PALB_S:ASAT_S | -0.326 |
| AP_S:ALB_S | -0.325 |
| PROT_S:CYSC_S | -0.324 |
| NA_S:BILID_S | -0.324 |
| B_PLT_E:ALB_S | 0.323 |
| CRP_S:ASAT_S | 0.322 |
| NA_S:CA_S | 0.320 |
| VDT_OH_S:PALB_S | 0.312 |
| IL6_S:ASAT_S | 0.311 |
| CRP_S:CHOLG_S | -0.309 |
| VDT_OH_S:CRP_S | -0.306 |
| VDT_OH_S:CA_S | 0.303 |
| NA_S:BILI_S | -0.301 |
| CRP_S:B_WBC_E | 0.301 |
| PALB_S:CYSC_S | -0.300 |
| VDT_OH_S:PTH_S | -0.300 |
| PROT_S:CRP_S | -0.299 |
| B_PLT_E:B_MPV_E | -0.299 |
| GGT_S:ALAT_S | 0.298 |
| GGT_S:CHOLG_S | 0.297 |
| CA_S:ASAT_S | -0.296 |
| VDT_OH_S:INR_C | -0.292 |
| BILID_S:AP_S | 0.290 |
| VDT_OH_S:ALB_S | 0.286 |
| CRP_S:CRE_S | 0.286 |
| VDT_OH_S:CYSC_S | -0.283 |
| VDT_OH_S:CHOLG_S | 0.276 |
| PROT_S:B_PLT_E | 0.270 |
| P_S:B_PLT_E | 0.264 |
| AP_S:ALAT_S | 0.260 |
| CRP_S:CL_S | -0.260 |
| PROT_S:CRE_S | -0.259 |
| CRE_S:CHE_S | -0.257 |
| CHE_S:AP_S | -0.252 |
| CL_S:B_WBC_E | -0.249 |
| PTH_S:CA_S | -0.245 |
| IL6_S:AP_S | 0.244 |
| IL6_S:CL_S | -0.244 |
| NA_S:CHOLG_S | 0.243 |
| VDT_OH_S:BILID_S | -0.235 |
| IL6_S:B_WBC_E | 0.232 |
| P_S:CRE_S | 0.230 |
| NA_S:CRE_S | -0.224 |
| CA_S:AP_S | -0.220 |
| GGT_S:CRP_S | 0.219 |
| CRE_S:B_WBC_E | 0.218 |
| CRE_S:ALB_S | -0.216 |
| VDT_OH_S:BILI_S | -0.215 |
| PTH_S:IL6_S | 0.210 |
| BILI_S:AP_S | 0.210 |
| CL_S:B_MPV_E | 0.208 |
| VDT_OH_S:PROT_S | 0.208 |
| PALB_S:AP_S | -0.203 |
| P_S:B_WBC_E | 0.194 |
| NA_S:AP_S | -0.191 |
| IL6_S:B_PLT_E | -0.190 |
| VDT_OH_S:NA_S | 0.188 |
| CYSC_S:AP_S | 0.185 |
| CYSC_S:B_WBC_E | 0.181 |
| NA_S:B_WBC_E | -0.179 |
| B_PLT_E:ASAT_S | -0.178 |
| PTH_S:CRP_S | 0.174 |
| NA_S:B_MPV_E | 0.173 |
| P_S:CYSC_S | 0.172 |
| CL_S:CHE_S | 0.169 |
| BILI_S:ALAT_S | 0.167 |
| GGT_S:B_PLT_E | 0.166 |
| CYSC_S:ASAT_S | 0.165 |
| NA_S:ASAT_S | -0.163 |
| BILID_S:ALAT_S | 0.162 |
| VDT_OH_S:B_WBC_E | -0.161 |
| CL_S:BILI_S | -0.161 |
| CYSC_S:ALAT_S | -0.159 |
| PALB_S:P_S | 0.159 |
| PTH_S:PROT_S | -0.156 |
| CRE_S:CHOLG_S | -0.153 |
| PROT_S:ASAT_S | -0.146 |
| VDT_OH_S:AP_S | -0.146 |
| PTH_S:AP_S | 0.145 |
| CRE_S:CA_S | -0.144 |
| B_MPV_E:ALAT_S | 0.144 |
| PTH_S:CHE_S | -0.144 |
| P_S:CA_S | 0.141 |
| CL_S:BILID_S | -0.141 |
| INR_C:GGT_S | -0.140 |
| CYSC_S:CL_S | -0.138 |
| VDT_OH_S:ASAT_S | -0.136 |
| CRE_S:BILID_S | 0.133 |
| CL_S:B_PLT_E | -0.132 |
| PTH_S:CHOLG_S | -0.130 |
| PROT_S:CL_S | -0.128 |
| PROT_S:GGT_S | 0.128 |
| P_S:INR_C | -0.127 |
| PALB_S:GGT_S | 0.127 |
| PTH_S:B_WBC_E | 0.124 |
| CHOLG_S:ASAT_S | -0.124 |
| CL_S:AP_S | -0.124 |
| CRE_S:ALAT_S | -0.124 |
| P_S:BILI_S | -0.121 |
| PALB_S:CL_S | 0.120 |
| B_WBC_E:B_MPV_E | -0.118 |
| INR_C:CL_S | -0.117 |
| P_S:BILID_S | -0.115 |
| INR_C:CRE_S | 0.111 |
| B_MPV_E:ASAT_S | 0.110 |
| PTH_S:GGT_S | 0.110 |
| VDT_OH_S:CRE_S | -0.109 |
| GGT_S:B_WBC_E | 0.103 |
| CRE_S:BILI_S | 0.101 |
| B_WBC_E:ASAT_S | 0.098 |
| P_S:CL_S | -0.098 |
| B_WBC_E:AP_S | 0.098 |
| P_S:ALB_S | 0.097 |
| CYSC_S:B_PLT_E | -0.095 |
| VDT_OH_S:CL_S | 0.093 |
| INR_C:AP_S | 0.093 |
| B_WBC_E:ALAT_S | 0.091 |
| PTH_S:NA_S | -0.091 |
| BILID_S:B_MPV_E | 0.087 |
| PALB_S:B_WBC_E | 0.085 |
| CL_S:ALB_S | 0.082 |
| IL6_S:B_MPV_E | -0.081 |
| CRP_S:B_MPV_E | -0.081 |
| CRE_S:CL_S | -0.080 |
| PALB_S:B_MPV_E | -0.079 |
| IL6_S:ALAT_S | -0.078 |
| NA_S:GGT_S | -0.077 |
| PTH_S:CL_S | -0.073 |
| P_S:CHOLG_S | 0.073 |
| PTH_S:ALB_S | -0.073 |
| P_S:NA_S | -0.072 |
| P_S:B_MPV_E | -0.072 |
| CHOLG_S:ALAT_S | 0.072 |
| CL_S:ASAT_S | -0.070 |
| BILI_S:B_MPV_E | 0.069 |
| B_PLT_E:ALAT_S | -0.069 |
| CHOLG_S:AP_S | 0.068 |
| CHE_S:ALAT_S | 0.068 |
| VDT_OH_S:ALAT_S | 0.066 |
| VDT_OH_S:B_MPV_E | 0.066 |
| PROT_S:B_WBC_E | -0.065 |
| PROT_S:P_S | 0.065 |
| PTH_S:ASAT_S | 0.064 |
| P_S:GGT_S | 0.063 |
| PTH_S:ALAT_S | -0.062 |
| B_MPV_E:AP_S | 0.061 |
| P_S:ALAT_S | -0.060 |
| P_S:AP_S | 0.060 |
| PROT_S:B_MPV_E | -0.059 |
| B_PLT_E:AP_S | 0.059 |
| PTH_S:BILID_S | 0.058 |
| PTH_S:INR_C | 0.057 |
| CRP_S:B_PLT_E | -0.056 |
| PROT_S:NA_S | 0.056 |
| VDT_OH_S:GGT_S | -0.056 |
| PTH_S:B_MPV_E | -0.055 |
| GGT_S:B_MPV_E | 0.055 |
| INR_C:ALAT_S | 0.053 |
| GGT_S:CL_S | -0.052 |
| PTH_S:BILI_S | 0.048 |
| CRP_S:ALAT_S | 0.047 |
| CL_S:CA_S | 0.046 |
| CRE_S:B_PLT_E | 0.045 |
| GGT_S:CYSC_S | 0.045 |
| P_S:CHE_S | 0.043 |
| BILID_S:B_WBC_E | 0.042 |
| P_S:ASAT_S | -0.040 |
| PROT_S:AP_S | -0.040 |
| CRE_S:AP_S | 0.039 |
| B_MPV_E:ALB_S | -0.039 |
| IL6_S:GGT_S | 0.038 |
| BILI_S:B_WBC_E | 0.036 |
| CA_S:B_MPV_E | 0.036 |
| PTH_S:B_PLT_E | 0.035 |
| ALB_S:ALAT_S | -0.035 |
| B_WBC_E:ALB_S | -0.035 |
| GGT_S:BILID_S | 0.032 |
| CRE_S:B_MPV_E | -0.031 |
| PALB_S:ALAT_S | 0.031 |
| PALB_S:CRE_S | -0.030 |
| GGT_S:BILI_S | -0.029 |
| VDT_OH_S:P_S | -0.028 |
| GGT_S:ALB_S | -0.027 |
| CHE_S:B_MPV_E | 0.026 |
| CA_S:B_WBC_E | 0.021 |
| CL_S:CHOLG_S | 0.020 |
| P_S:IL6_S | -0.019 |
| P_S:CRP_S | -0.019 |
| CHOLG_S:B_WBC_E | 0.011 |
| CHE_S:B_WBC_E | -0.010 |
| GGT_S:CA_S | -0.010 |
| CRE_S:ASAT_S | 0.009 |
| NA_S:B_PLT_E | 0.009 |
| NA_S:ALAT_S | 0.009 |
| CA_S:ALAT_S | -0.009 |
| CYSC_S:B_MPV_E | -0.006 |
| INR_C:B_MPV_E | -0.006 |
| CL_S:ALAT_S | 0.006 |
| PTH_S:PALB_S | -0.006 |
| INR_C:B_WBC_E | 0.005 |
| GGT_S:CRE_S | 0.004 |
| CHOLG_S:B_MPV_E | 0.003 |
| GGT_S:CHE_S | 0.003 |
| PTH_S:P_S | -0.001 |
| PROT_S:ALAT_S | 0.001 |
| VDT_OH_S:B_PLT_E | 0.000 |
sessionInfo()R version 4.2.0 (2022-04-22)
Platform: x86_64-unknown-linux-gnu (64-bit)
Matrix products: default
BLAS/LAPACK: /gnu/store/ras6dprsw3wm3swk23jjp8ww5dwxj333-openblas-0.3.18/lib/libopenblasp-r0.3.18.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] targets_0.12.1 corrplot_0.92
loaded via a namespace (and not attached):
[1] Rcpp_1.0.8.3 highr_0.9 pillar_1.7.0 compiler_4.2.0
[5] bslib_0.3.1 later_1.3.0 jquerylib_0.1.4 git2r_0.30.1
[9] workflowr_1.7.0 tools_4.2.0 digest_0.6.29 jsonlite_1.8.0
[13] evaluate_0.15 lifecycle_1.0.1 tibble_3.1.7 pkgconfig_2.0.3
[17] rlang_1.0.2 igraph_1.3.1 cli_3.3.0 yaml_2.3.5
[21] xfun_0.31 fastmap_1.1.0 withr_2.5.0 stringr_1.4.0
[25] knitr_1.39 fs_1.5.2 vctrs_0.4.1 sass_0.4.1
[29] tidyselect_1.1.2 rprojroot_2.0.3 data.table_1.14.2 glue_1.6.2
[33] R6_2.5.1 processx_3.5.3 fansi_1.0.3 base64url_1.4
[37] rmarkdown_2.14 bookdown_0.26 purrr_0.3.4 callr_3.7.0
[41] magrittr_2.0.3 whisker_0.4 codetools_0.2-18 ps_1.7.0
[45] backports_1.4.1 promises_1.2.0.1 ellipsis_0.3.2 htmltools_0.5.2
[49] httpuv_1.6.5 utf8_1.2.2 stringi_1.7.6 crayon_1.5.1