Last updated: 2022-06-15

Checks: 2 0

Knit directory: rotation2/

This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: d999122

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version d999122. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated: 


Unstaged changes:
    Modified:   .RData
    Modified:   .Rhistory

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
html 0aff555 chenh19 2022-06-15 Build site.
html a4e1e73 chenh19 2022-06-15 Build site.
html f0e98f9 chenh19 2022-06-14 Build site.
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Rmd 1739dd9 chenh19 2022-06-14 wflow_publish("analysis/*.Rmd")
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html 44517c1 chenh19 2022-06-13 Build site.
html da08f11 chenh19 2022-06-13 Build site.
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Rmd f871f85 chenh19 2022-06-13 wflow_publish("analysis/*.Rmd")
html b8870d3 chenh19 2022-06-13 Build site.
Rmd 6d54117 chenh19 2022-06-13 wflow_publish("analysis/*.Rmd")
html 719925e chenh19 2022-06-13 Build site.
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html 3373521 chenh19 2022-06-13 Build site.
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Rmd 6e56d75 chenh19 2022-06-13 wflow_publish("analysis/*.Rmd")
html f653f7b chenh19 2022-06-13 Build site.
html d69c892 chenh19 2022-06-13 Build site.
Rmd 866aca4 chenh19 2022-06-13 wflow_publish("analysis/*.Rmd")
html 34d877d chenh19 2022-06-13 Build site.
Rmd 1a50e1e chenh19 2022-06-13 wflow_publish("analysis/*.Rmd")
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Rmd bfe3b96 chenh19 2022-06-13 wflow_publish("analysis/*.Rmd")
html c411223 chenh19 2022-06-13 Build site.
Rmd f777512 chenh19 2022-06-13 wflow_publish("analysis/*.Rmd")
html 1daccd2 chenh19 2022-06-13 Build site.
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Rmd 26f455b chenh19 2022-06-13 update
html 26f455b chenh19 2022-06-13 update

GTD

Project-1: STING-seq

Project-2: SCEPTRE

Miscellaneous: