Last updated: 2021-10-27
Checks: 7 0
Knit directory: emlr_obs_v_XXX/
This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.
Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.
Great job! The global environment was empty. Objects defined in the global environment can affect the analysis in your R Markdown file in unknown ways. For reproduciblity it’s best to always run the code in an empty environment.
The command set.seed(20200707) was run prior to running the code in the R Markdown file. Setting a seed ensures that any results that rely on randomness, e.g. subsampling or permutations, are reproducible.
Great job! Recording the operating system, R version, and package versions is critical for reproducibility.
Nice! There were no cached chunks for this analysis, so you can be confident that you successfully produced the results during this run.
Great job! Using relative paths to the files within your workflowr project makes it easier to run your code on other machines.
Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.
The results in this page were generated with repository version e111683. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.
Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:
Ignored files:
Ignored: .Rhistory
Ignored: .Rproj.user/
Unstaged changes:
Modified: code/Workflowr_project_managment.R
Modified: data/auxillary/params_local.rds
Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.
These are the previous versions of the repository in which changes were made to the R Markdown (analysis/config_parameterization_local.Rmd) and HTML (docs/config_parameterization_local.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.
| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | e111683 | jens-daniel-mueller | 2021-10-27 | test with tco2 target variable |
| html | 22750db | jens-daniel-mueller | 2021-10-27 | Build site. |
| Rmd | 8e66ca5 | jens-daniel-mueller | 2021-10-27 | test with Indian ocean lon bands |
| html | 3992e41 | jens-daniel-mueller | 2021-10-27 | Build site. |
| Rmd | 40fc487 | jens-daniel-mueller | 2021-10-27 | test with 5 Indian ocean lat bands |
| Rmd | 5732286 | jens-daniel-mueller | 2021-10-25 | manual commit |
| html | f9280c7 | jens-daniel-mueller | 2021-10-21 | Build site. |
| html | bfe90e6 | jens-daniel-mueller | 2021-10-21 | Build site. |
| Rmd | 0303580 | jens-daniel-mueller | 2021-10-21 | including 1989 in first era |
| html | 78a956e | jens-daniel-mueller | 2021-10-21 | Build site. |
| Rmd | 9f45187 | jens-daniel-mueller | 2021-10-20 | gruber 2019 time frame |
| html | 1ba14cf | jens-daniel-mueller | 2021-10-20 | Build site. |
| Rmd | 06bb915 | jens-daniel-mueller | 2021-10-20 | test without f flag 0 and 9 |
| html | dc0723b | jens-daniel-mueller | 2021-10-19 | Build site. |
| Rmd | d07f6a3 | jens-daniel-mueller | 2021-10-19 | merging depth of surface approach defined in params_local |
| html | cd0ebd8 | jens-daniel-mueller | 2021-10-18 | Build site. |
| Rmd | 6d2aad5 | jens-daniel-mueller | 2021-10-18 | merged surface and eMLR approach |
| html | 046c556 | jens-daniel-mueller | 2021-10-07 | Build site. |
| html | ac73c23 | jens-daniel-mueller | 2021-10-07 | Build site. |
| html | 0bd4ea2 | jens-daniel-mueller | 2021-10-07 | Build site. |
| Rmd | 6969c18 | jens-daniel-mueller | 2021-10-07 | check data distribution |
| html | 6969c18 | jens-daniel-mueller | 2021-10-07 | check data distribution |
| html | 596734b | jens-daniel-mueller | 2021-10-07 | Build site. |
| Rmd | e74b5cf | jens-daniel-mueller | 2021-10-07 | check data distribution |
| html | ac5c92d | jens-daniel-mueller | 2021-10-01 | Build site. |
| Rmd | 67a759e | jens-daniel-mueller | 2021-10-01 | code cleaning |
| html | 06afaca | jens-daniel-mueller | 2021-09-23 | Build site. |
| Rmd | ce93600 | jens-daniel-mueller | 2021-09-23 | test 1990 cutoff for first era |
| html | 410dd46 | jens-daniel-mueller | 2021-09-22 | Build site. |
| html | 5a36231 | jens-daniel-mueller | 2021-09-22 | Build site. |
| Rmd | ef591b4 | jens-daniel-mueller | 2021-09-22 | rerun with alternative rmse vif selection |
| html | c0bbbe4 | jens-daniel-mueller | 2021-09-22 | Build site. |
| Rmd | d69f5d5 | jens-daniel-mueller | 2021-09-22 | rerun with 7 predictors |
| html | 9eac969 | jens-daniel-mueller | 2021-08-30 | Build site. |
| Rmd | 905d7be | jens-daniel-mueller | 2021-08-30 | rerun with surface dic regression approach |
| html | 3a584b7 | jens-daniel-mueller | 2021-08-30 | Build site. |
| Rmd | ec2c293 | jens-daniel-mueller | 2021-08-30 | rerun with surface dic regression approach |
| html | 6e17588 | jens-daniel-mueller | 2021-08-24 | Build site. |
| html | deb425c | jens-daniel-mueller | 2021-08-24 | Build site. |
| Rmd | 7cb7410 | jens-daniel-mueller | 2021-08-24 | test surface estimates for pre 2000 era |
| html | 534854b | jens-daniel-mueller | 2021-08-19 | Build site. |
| Rmd | 1a3562a | jens-daniel-mueller | 2021-08-19 | including gamma 26 slab, and all surface equi |
| html | 77f4ba7 | jens-daniel-mueller | 2021-08-19 | Build site. |
| Rmd | 4a790f3 | jens-daniel-mueller | 2021-08-19 | test with gap filling after weak removal of outliers |
| html | ece96df | jens-daniel-mueller | 2021-08-19 | Build site. |
| Rmd | eb50c9e | jens-daniel-mueller | 2021-08-19 | test with gap filling after strong removal of outliers |
| html | 91d43c8 | jens-daniel-mueller | 2021-08-19 | Build site. |
| Rmd | 699285b | jens-daniel-mueller | 2021-08-19 | replace cleaned data with canyon-B |
| html | d87504f | jens-daniel-mueller | 2021-08-19 | Build site. |
| Rmd | 956cd67 | jens-daniel-mueller | 2021-08-19 | replace cleaned data with canyon-B |
| html | e7e5c45 | jens-daniel-mueller | 2021-08-19 | Build site. |
| Rmd | 03cdf98 | jens-daniel-mueller | 2021-08-19 | replace cleaned data with canyon-B |
| html | dfee085 | jens-daniel-mueller | 2021-08-19 | Build site. |
| Rmd | 94f19d8 | jens-daniel-mueller | 2021-08-19 | replace cleaned data with canyon-B |
| html | 27c99b8 | jens-daniel-mueller | 2021-08-19 | Build site. |
| Rmd | 4d618d3 | jens-daniel-mueller | 2021-08-19 | test with gap filling of removed outliers |
| html | a03f2f0 | jens-daniel-mueller | 2021-08-18 | Build site. |
| Rmd | 3fdf621 | jens-daniel-mueller | 2021-08-18 | test neighbouring trefs + auto slab correction |
| html | 9335b31 | jens-daniel-mueller | 2021-08-10 | Build site. |
| Rmd | 26d595c | jens-daniel-mueller | 2021-08-10 | with P, AIP basins |
| html | 9943b45 | jens-daniel-mueller | 2021-08-10 | Build site. |
| Rmd | 4b27dd8 | jens-daniel-mueller | 2021-08-10 | without P, AIP basins |
| html | 0b00a2b | jens-daniel-mueller | 2021-08-09 | Build site. |
| Rmd | e675869 | jens-daniel-mueller | 2021-08-09 | without P, AIP basins |
| html | 755c6b1 | jens-daniel-mueller | 2021-08-09 | Build site. |
| Rmd | dd6419c | jens-daniel-mueller | 2021-08-09 | revised global MLR cleaning |
| html | c65f2e3 | jens-daniel-mueller | 2021-08-09 | Build site. |
| Rmd | f0efda5 | jens-daniel-mueller | 2021-08-09 | revised canyon-b cleaning and created stats files |
| html | 70b290d | jens-daniel-mueller | 2021-08-09 | Build site. |
| Rmd | dee6b31 | jens-daniel-mueller | 2021-08-09 | revised canyon-b cleaning |
| html | cd8e0d5 | jens-daniel-mueller | 2021-08-06 | Build site. |
| html | 15773a0 | jens-daniel-mueller | 2021-08-06 | included calculation of revelle factor |
| html | da61d1a | jens-daniel-mueller | 2021-08-06 | Build site. |
| Rmd | 39bfacc | jens-daniel-mueller | 2021-08-06 | test with one global basin separation |
| html | 340d731 | jens-daniel-mueller | 2021-08-06 | Build site. |
| html | 71546e4 | jens-daniel-mueller | 2021-08-06 | test with stricter CANYON-B filtering |
| Rmd | 9486592 | jens-daniel-mueller | 2021-08-06 | test with stricter CANYON-B filtering |
| html | 29444a1 | jens-daniel-mueller | 2021-08-05 | Build site. |
| Rmd | 019702d | jens-daniel-mueller | 2021-08-05 | test with cruise and sample bases CANYON-B filtering |
| html | c4b789f | jens-daniel-mueller | 2021-08-05 | Build site. |
| Rmd | 8f73f84 | jens-daniel-mueller | 2021-08-05 | depth threshold for CANYON-B filtering |
| html | 42e80c0 | jens-daniel-mueller | 2021-08-04 | Build site. |
| Rmd | 76d6a79 | jens-daniel-mueller | 2021-08-04 | test with equilibrium in high lat |
| html | 48f6eed | jens-daniel-mueller | 2021-08-04 | Build site. |
| Rmd | 7499718 | jens-daniel-mueller | 2021-08-04 | test with eMLR to surface |
| html | 1c597ab | jens-daniel-mueller | 2021-08-04 | Build site. |
| html | 81a46a4 | jens-daniel-mueller | 2021-08-03 | Build site. |
| Rmd | fc0b511 | jens-daniel-mueller | 2021-08-03 | test with intermediate CANYON-B offset threshold |
| html | b88c61b | jens-daniel-mueller | 2021-08-03 | Build site. |
| Rmd | 02fbeae | jens-daniel-mueller | 2021-08-03 | test with strict CANYON-B offset threshold |
| html | 0f0d5e5 | jens-daniel-mueller | 2021-08-03 | Build site. |
| Rmd | 4d7bb5a | jens-daniel-mueller | 2021-08-03 | test rlm model fitting |
| html | a53656d | jens-daniel-mueller | 2021-08-03 | Build site. |
| Rmd | eb00453 | jens-daniel-mueller | 2021-08-03 | test with P predictors, and oxygen, but no P* |
| html | 88f7356 | jens-daniel-mueller | 2021-08-02 | Build site. |
| Rmd | 296fc33 | jens-daniel-mueller | 2021-08-02 | test without P predictors, but oxygen |
| html | d759279 | jens-daniel-mueller | 2021-08-02 | Build site. |
| Rmd | defe32c | jens-daniel-mueller | 2021-08-02 | test without P predictors, but oxygen |
| html | 127b801 | jens-daniel-mueller | 2021-07-24 | Build site. |
| Rmd | 414e9ff | jens-daniel-mueller | 2021-07-24 | test v_201 |
| html | 1f65ef1 | jens-daniel-mueller | 2021-07-23 | Build site. |
| Rmd | 56485c6 | jens-daniel-mueller | 2021-07-23 | rebuild: complete revision |
| html | 912d90e | jens-daniel-mueller | 2021-07-23 | Build site. |
| html | 2477316 | jens-daniel-mueller | 2021-07-23 | rebuild: surface dcant mapping seperate |
| html | c9ccc00 | jens-daniel-mueller | 2021-07-22 | Build site. |
| html | c75b2a0 | jens-daniel-mueller | 2021-07-22 | Build site. |
| Rmd | 7d6951d | jens-daniel-mueller | 2021-07-22 | surface dcant mapping seperate |
| html | 426b2df | jens-daniel-mueller | 2021-07-21 | Build site. |
| html | 78fe930 | jens-daniel-mueller | 2021-07-21 | Build site. |
| Rmd | ee0e941 | jens-daniel-mueller | 2021-07-21 | surface dcant mapping with preformed DIC |
| Rmd | 3ef0100 | jens-daniel-mueller | 2021-07-13 | complete revision |
| html | 971ce87 | jens-daniel-mueller | 2021-07-13 | Build site. |
| Rmd | 89d9fcb | jens-daniel-mueller | 2021-07-13 | complete revision |
| html | c18a8b1 | jens-daniel-mueller | 2021-07-09 | Build site. |
| Rmd | 795a3b0 | jens-daniel-mueller | 2021-07-09 | complete revision |
| html | 910d64a | jens-daniel-mueller | 2021-07-02 | Build site. |
| html | 1cbf907 | jens-daniel-mueller | 2021-07-02 | Build site. |
| Rmd | a2c1536 | jens-daniel-mueller | 2021-07-02 | testrun with CANYON-B NA filling |
| html | 749d84e | jens-daniel-mueller | 2021-06-30 | Build site. |
| Rmd | 7fa4dbd | jens-daniel-mueller | 2021-06-30 | added histogram |
| html | 955f5dc | jens-daniel-mueller | 2021-06-29 | Build site. |
| Rmd | b7747bd | jens-daniel-mueller | 2021-06-29 | update standard configuration |
| html | 9480f94 | jens-daniel-mueller | 2021-06-29 | Build site. |
| html | d054c39 | jens-daniel-mueller | 2021-06-24 | Build site. |
| Rmd | ce91a31 | jens-daniel-mueller | 2021-06-24 | test with merged slabs |
| html | 87e2739 | jens-daniel-mueller | 2021-06-24 | Build site. |
| Rmd | 6e94317 | jens-daniel-mueller | 2021-06-24 | test coarse grid rarefication |
| html | 4fcd066 | jens-daniel-mueller | 2021-06-24 | Build site. |
| Rmd | ee48dee | jens-daniel-mueller | 2021-06-24 | test coarse grid rarefication |
| html | b960d93 | jens-daniel-mueller | 2021-06-24 | Build site. |
| Rmd | 79ecdc5 | jens-daniel-mueller | 2021-06-24 | add observation grid to map |
| html | 00dcc97 | jens-daniel-mueller | 2021-06-23 | Build site. |
| Rmd | 891392a | jens-daniel-mueller | 2021-06-23 | revised bias labels |
| html | 3b6387f | jens-daniel-mueller | 2021-06-18 | Build site. |
| html | 3052a6c | jens-daniel-mueller | 2021-06-15 | Build site. |
| html | 3cb64bd | jens-daniel-mueller | 2021-06-15 | Build site. |
| html | c6b3da6 | jens-daniel-mueller | 2021-06-14 | Build site. |
| html | 48c73fc | jens-daniel-mueller | 2021-06-14 | Build site. |
| html | 439ee80 | jens-daniel-mueller | 2021-06-11 | Build site. |
| html | 33ffcab | jens-daniel-mueller | 2021-06-10 | Build site. |
| html | 7e1f407 | jens-daniel-mueller | 2021-06-10 | Build site. |
| html | 2cbe18c | jens-daniel-mueller | 2021-06-10 | added zonal mean section control plots |
| html | 69c79d0 | jens-daniel-mueller | 2021-06-08 | Build site. |
| html | 1772903 | jens-daniel-mueller | 2021-06-07 | Build site. |
| html | 594ed9a | jens-daniel-mueller | 2021-06-04 | Build site. |
| html | db7df0e | jens-daniel-mueller | 2021-06-04 | rebuild without overlapping eras |
| Rmd | 71f97a3 | jens-daniel-mueller | 2021-06-04 | rebuild without overlapping eras |
| html | 2edc791 | jens-daniel-mueller | 2021-06-04 | Build site. |
| html | 207339d | jens-daniel-mueller | 2021-06-03 | Build site. |
| html | 315710b | jens-daniel-mueller | 2021-06-03 | include anomalous changes |
| html | be90356 | jens-daniel-mueller | 2021-06-02 | Build site. |
| Rmd | 12eeaa6 | jens-daniel-mueller | 2021-06-02 | test run with beta version of GLODAPv2.2021 |
| html | d37a85d | jens-daniel-mueller | 2021-05-31 | Build site. |
| Rmd | 1c2aff8 | jens-daniel-mueller | 2021-05-31 | test run with beta version of GLODAPv2.2021 |
| html | 4b7a5ee | jens-daniel-mueller | 2021-05-28 | Build site. |
| Rmd | a61014f | jens-daniel-mueller | 2021-05-28 | test run with cstar target variable |
| html | 12b455a | jens-daniel-mueller | 2021-05-27 | Build site. |
| Rmd | ee13efb | jens-daniel-mueller | 2021-05-27 | optional source of local params fully implemented |
| html | 8c736a6 | jens-daniel-mueller | 2021-05-27 | Build site. |
| html | 25bd183 | jens-daniel-mueller | 2021-05-26 | Build site. |
| Rmd | e2b3434 | jens-daniel-mueller | 2021-05-26 | generate seperate output |
| html | 5fe3035 | jens-daniel-mueller | 2021-05-26 | Build site. |
| html | 4c5302d | jens-daniel-mueller | 2021-05-26 | Build site. |
| html | 189f362 | jens-daniel-mueller | 2021-05-26 | Build site. |
| html | f314fc7 | jens-daniel-mueller | 2021-05-26 | Build site. |
| html | cf773c5 | jens-daniel-mueller | 2021-05-26 | Build site. |
| Rmd | 5b0e29c | jens-daniel-mueller | 2021-05-26 | generate seperate output |
| html | b79cb2d | jens-daniel-mueller | 2021-05-20 | Build site. |
| html | 62bd574 | jens-daniel-mueller | 2021-05-20 | Build site. |
| Rmd | 14a7aac | jens-daniel-mueller | 2021-05-20 | rerun overlapping eras |
| html | 7c56c39 | jens-daniel-mueller | 2021-05-19 | Build site. |
| html | 0de759e | jens-daniel-mueller | 2021-05-13 | Build site. |
| html | 0a84f2a | jens-daniel-mueller | 2021-05-12 | Build site. |
| html | 969e631 | jens-daniel-mueller | 2021-05-12 | Build site. |
| html | d2a83bc | jens-daniel-mueller | 2021-04-16 | Build site. |
| html | 84b1fe3 | jens-daniel-mueller | 2021-04-16 | Build site. |
| Rmd | d6b0b34 | jens-daniel-mueller | 2021-04-16 | use consistent tref |
| html | c0a47df | jens-daniel-mueller | 2021-04-16 | Build site. |
| html | 50290e8 | jens-daniel-mueller | 2021-04-16 | overlapping eras |
| Rmd | 934e795 | jens-daniel-mueller | 2021-04-16 | overlapping eras |
| html | a00ec94 | jens-daniel-mueller | 2021-04-16 | Build site. |
| html | 7e4f671 | jens-daniel-mueller | 2021-04-16 | Build site. |
| html | b6fe355 | jens-daniel-mueller | 2021-04-16 | Build site. |
| html | 97d2272 | jens-daniel-mueller | 2021-04-16 | Build site. |
| Rmd | f70f4dc | jens-daniel-mueller | 2021-04-16 | regular eras |
| html | 81b7c6d | jens-daniel-mueller | 2021-04-16 | Build site. |
| Rmd | 0b33708 | jens-daniel-mueller | 2021-04-16 | deep Pacific slabs |
| html | ddec5b7 | jens-daniel-mueller | 2021-04-15 | Build site. |
| Rmd | 7084d27 | jens-daniel-mueller | 2021-04-15 | overlapping breakpoints |
| html | 29edae5 | jens-daniel-mueller | 2021-04-14 | Build site. |
| Rmd | 3ab8145 | jens-daniel-mueller | 2021-04-14 | 2008 breakpoint |
| html | 099d566 | jens-daniel-mueller | 2021-04-14 | Build site. |
| Rmd | e76af46 | jens-daniel-mueller | 2021-04-14 | 2 basins, high VIF |
| html | bb44686 | jens-daniel-mueller | 2021-04-14 | Build site. |
| Rmd | 6fcc01e | jens-daniel-mueller | 2021-04-14 | AIP basins, low VIF |
| html | bf40480 | jens-daniel-mueller | 2021-04-13 | Build site. |
| Rmd | fdb5a55 | jens-daniel-mueller | 2021-04-13 | deeper slabs in Ind_Pac, higher VIF |
| html | 9f31fe3 | jens-daniel-mueller | 2021-04-13 | Build site. |
| Rmd | 80e1ee3 | jens-daniel-mueller | 2021-04-13 | rerun post-2000 with model data |
| html | c98be84 | jens-daniel-mueller | 2021-04-13 | Build site. |
| html | 338dd3c | jens-daniel-mueller | 2021-04-09 | Build site. |
| html | a79ca2c | jens-daniel-mueller | 2021-04-09 | included model data |
| html | 7831fd3 | jens-daniel-mueller | 2021-04-09 | Build site. |
| html | 20b26d4 | jens-daniel-mueller | 2021-04-08 | Build site. |
| html | c0895f8 | jens-daniel-mueller | 2021-04-07 | Build site. |
| html | 156d5b7 | jens-daniel-mueller | 2021-04-07 | Build site. |
| html | eb827c9 | jens-daniel-mueller | 2021-04-07 | Build site. |
| html | 857bad3 | jens-daniel-mueller | 2021-03-24 | Build site. |
| html | 03b6009 | jens-daniel-mueller | 2021-03-23 | removed before copying template |
| html | 555750f | jens-daniel-mueller | 2021-03-23 | Build site. |
| Rmd | 2021931 | jens-daniel-mueller | 2021-03-23 | restriction to two eras and new definition procedure |
| html | 685338e | jens-daniel-mueller | 2021-03-23 | Build site. |
| Rmd | 64b4756 | jens-daniel-mueller | 2021-03-23 | restriction to two eras and new definition procedure |
| html | 886f523 | jens-daniel-mueller | 2021-03-23 | Build site. |
| Rmd | 8a3a9dd | jens-daniel-mueller | 2021-03-23 | restriction to two eras and new definition procedure |
| html | 10c1346 | jens-daniel-mueller | 2021-03-23 | Build site. |
| Rmd | b697e7a | jens-daniel-mueller | 2021-03-23 | restriction to two eras and new definition procedure |
| html | f155edd | jens-daniel-mueller | 2021-03-23 | Build site. |
| Rmd | 6601b92 | jens-daniel-mueller | 2021-03-23 | rerun w/o post 2012 era |
| html | 380d215 | jens-daniel-mueller | 2021-03-21 | Build site. |
| Rmd | 30ed6c6 | jens-daniel-mueller | 2021-03-21 | rerun with stronger vif threshold |
| html | 33b385b | jens-daniel-mueller | 2021-03-20 | Build site. |
| html | 108d6b2 | jens-daniel-mueller | 2021-03-20 | Build site. |
| Rmd | 2b99ba0 | jens-daniel-mueller | 2021-03-20 | included vif removel option |
| html | 330dcd0 | jens-daniel-mueller | 2021-03-20 | Build site. |
| html | 83a13de | jens-daniel-mueller | 2021-03-20 | Build site. |
| Rmd | fdd3c0a | jens-daniel-mueller | 2021-03-20 | re-run standard slabs |
| html | cf98c6d | jens-daniel-mueller | 2021-03-16 | Build site. |
| Rmd | a9930ea | jens-daniel-mueller | 2021-03-16 | one thick slab |
| html | a1d52ff | jens-daniel-mueller | 2021-03-15 | Build site. |
| Rmd | 7e351c0 | jens-daniel-mueller | 2021-03-15 | re-run with quality filters and new eras |
| html | 0bade3b | jens-daniel-mueller | 2021-03-15 | Build site. |
| Rmd | 9ebb3f2 | jens-daniel-mueller | 2021-03-15 | re-run without quality filters |
| html | 27c1f4b | jens-daniel-mueller | 2021-03-14 | Build site. |
| Rmd | 381eb8e | jens-daniel-mueller | 2021-03-14 | re-run with quality filters |
| html | af75ebf | jens-daniel-mueller | 2021-03-14 | Build site. |
| Rmd | e3dde84 | jens-daniel-mueller | 2021-03-14 | test without filtering |
| html | 5017709 | jens-daniel-mueller | 2021-03-11 | Build site. |
| Rmd | 7a953b4 | jens-daniel-mueller | 2021-03-11 | test with weak filtering |
| html | 585b07f | jens-daniel-mueller | 2021-03-11 | Build site. |
| Rmd | f568b8e | jens-daniel-mueller | 2021-03-11 | cleaned cstar filtering |
| html | 6482ed7 | jens-daniel-mueller | 2021-03-11 | Build site. |
| Rmd | 0ad56e3 | jens-daniel-mueller | 2021-03-11 | cleaned filtering based on comparison to CANYON-B |
| html | 85a5ed2 | jens-daniel-mueller | 2021-03-10 | Build site. |
| html | 52a5ea4 | jens-daniel-mueller | 2021-03-10 | Build site. |
| html | 6b260df | jens-daniel-mueller | 2021-03-10 | Build site. |
| html | 00688a1 | jens-daniel-mueller | 2021-03-05 | Build site. |
| html | 6c0bec6 | jens-daniel-mueller | 2021-03-05 | Build site. |
| html | 3c2ec33 | jens-daniel-mueller | 2021-03-05 | Build site. |
| html | af70b94 | jens-daniel-mueller | 2021-03-04 | Build site. |
| html | 86406d5 | jens-daniel-mueller | 2021-02-24 | Build site. |
| html | 3d3b4cc | jens-daniel-mueller | 2021-02-23 | Build site. |
| html | 7b672f7 | jens-daniel-mueller | 2021-01-11 | Build site. |
| Rmd | ba7cb46 | jens-daniel-mueller | 2021-01-11 | run sensitivity test |
| html | 33ba23c | jens-daniel-mueller | 2021-01-07 | Build site. |
| Rmd | 0ad30ba | jens-daniel-mueller | 2021-01-07 | removed GLODAP gamma filter, target variable mapped by eras+era |
| Rmd | a8c4dce | jens-daniel-mueller | 2020-12-23 | manual activation of A16 switch |
| Rmd | cfef575 | jens-daniel-mueller | 2020-12-23 | Option to select era shift of A16 cruise |
| Rmd | 31b2f90 | jens-daniel-mueller | 2020-12-23 | corrected predictor label |
| Rmd | f489bc9 | jens-daniel-mueller | 2020-12-23 | switched back to regular predictors |
| html | 318609d | jens-daniel-mueller | 2020-12-23 | adapted more variable predictor selection |
| html | 6949b06 | jens-daniel-mueller | 2020-12-23 | Build site. |
| Rmd | d3ad704 | jens-daniel-mueller | 2020-12-23 | test 106 |
| Rmd | 16fa143 | jens-daniel-mueller | 2020-12-23 | changed standard config parameters in template |
| html | 0aa2b50 | jens-daniel-mueller | 2020-12-23 | remove html before duplication |
| html | 39113c3 | jens-daniel-mueller | 2020-12-23 | Build site. |
| html | 2886da0 | jens-daniel-mueller | 2020-12-19 | Build site. |
| html | 02f0ee9 | jens-daniel-mueller | 2020-12-18 | cleaned up for copying template |
| html | 965dba3 | jens-daniel-mueller | 2020-12-18 | Build site. |
| html | 5d452fe | jens-daniel-mueller | 2020-12-18 | Build site. |
| Rmd | ca65bf5 | jens-daniel-mueller | 2020-12-18 | rebuild after final cleaning |
| html | 7bcb4eb | jens-daniel-mueller | 2020-12-18 | Build site. |
| html | d397028 | jens-daniel-mueller | 2020-12-18 | Build site. |
| html | 7131186 | jens-daniel-mueller | 2020-12-17 | Build site. |
| html | 22b07fb | jens-daniel-mueller | 2020-12-17 | Build site. |
| html | a84ff3c | jens-daniel-mueller | 2020-12-17 | Build site. |
| Rmd | 40369db | jens-daniel-mueller | 2020-12-17 | model selection criterion added |
| html | f3a708f | jens-daniel-mueller | 2020-12-17 | Build site. |
| html | e4ca289 | jens-daniel-mueller | 2020-12-16 | Build site. |
| html | 158fe26 | jens-daniel-mueller | 2020-12-15 | Build site. |
| html | 7a9a4cb | jens-daniel-mueller | 2020-12-15 | Build site. |
| Rmd | d234226 | jens-daniel-mueller | 2020-12-15 | rebuild with cstar_tref |
| html | 61b263c | jens-daniel-mueller | 2020-12-15 | Build site. |
| Rmd | 48e9693 | jens-daniel-mueller | 2020-12-15 | test with target variable tco2 |
| html | 4d612dd | jens-daniel-mueller | 2020-12-15 | Build site. |
| Rmd | e7e5ff1 | jens-daniel-mueller | 2020-12-15 | rebuild with eMLR target variable selection |
| html | 953caf3 | jens-daniel-mueller | 2020-12-15 | Build site. |
| Rmd | 97dd0d6 | jens-daniel-mueller | 2020-12-14 | enabled auto path creation |
| html | 42daf5c | jens-daniel-mueller | 2020-12-14 | Build site. |
| html | 5cc68e2 | jens-daniel-mueller | 2020-12-14 | Build site. |
| Rmd | 00de567 | jens-daniel-mueller | 2020-12-14 | rebuild with new path |
| html | 984697e | jens-daniel-mueller | 2020-12-12 | Build site. |
| Rmd | 7648dbc | jens-daniel-mueller | 2020-12-12 | test 3 basins for MLR |
| html | 3ebff89 | jens-daniel-mueller | 2020-12-12 | Build site. |
| Rmd | a1aaa71 | jens-daniel-mueller | 2020-12-12 | selectable basinmask, rebuild |
| html | 7d82772 | jens-daniel-mueller | 2020-12-11 | Build site. |
| html | c8acfcb | jens-daniel-mueller | 2020-12-11 | Build site. |
| Rmd | 24e2c07 | jens-daniel-mueller | 2020-12-11 | selectable basinmask, try 5 |
| html | 2fd0a2a | jens-daniel-mueller | 2020-12-11 | Build site. |
| Rmd | cd436c1 | jens-daniel-mueller | 2020-12-11 | selectable basinmask |
| html | 7788175 | jens-daniel-mueller | 2020-12-09 | Build site. |
| Rmd | 64b795c | jens-daniel-mueller | 2020-12-09 | added histograms after data preparation |
| html | b01a367 | jens-daniel-mueller | 2020-12-09 | Build site. |
| Rmd | 71c63b0 | jens-daniel-mueller | 2020-12-09 | rerun with variable predictor assignment |
| html | 24a632f | jens-daniel-mueller | 2020-12-07 | Build site. |
| Rmd | 6f8a606 | jens-daniel-mueller | 2020-12-07 | rerun standard config |
| html | 92dca91 | jens-daniel-mueller | 2020-12-07 | Build site. |
| html | 6a8004b | jens-daniel-mueller | 2020-12-07 | Build site. |
| Rmd | a4ec6a0 | jens-daniel-mueller | 2020-12-07 | Keppler comparison run |
| html | 70bf1a5 | jens-daniel-mueller | 2020-12-07 | Build site. |
| Rmd | fe4f9b0 | jens-daniel-mueller | 2020-12-07 | run standard config |
| html | 7555355 | jens-daniel-mueller | 2020-12-07 | Build site. |
| Rmd | 263f926 | jens-daniel-mueller | 2020-12-07 | run with qc flag alos 0 |
| html | 143d6fa | jens-daniel-mueller | 2020-12-07 | Build site. |
| Rmd | 33b1973 | jens-daniel-mueller | 2020-12-07 | run with WOCE flag 2 only |
| html | 3c8a83c | jens-daniel-mueller | 2020-12-04 | Build site. |
| html | abc6818 | jens-daniel-mueller | 2020-12-03 | Build site. |
| Rmd | 992ba15 | jens-daniel-mueller | 2020-12-03 | rebuild with variable inventory depth |
| html | 090e4d5 | jens-daniel-mueller | 2020-12-02 | Build site. |
| html | 37e9dac | jens-daniel-mueller | 2020-12-02 | Build site. |
| html | 7c25f7a | jens-daniel-mueller | 2020-12-02 | Build site. |
| Rmd | 5ffd065 | jens-daniel-mueller | 2020-12-02 | rebuild with nice era labels |
| html | 22b2b8e | jens-daniel-mueller | 2020-12-02 | Build site. |
| Rmd | fb05352 | jens-daniel-mueller | 2020-12-02 | editorial changes |
| html | ec8dc38 | jens-daniel-mueller | 2020-12-02 | Build site. |
| html | c987de1 | jens-daniel-mueller | 2020-12-02 | Build site. |
| html | 632c84f | jens-daniel-mueller | 2020-12-02 | Build site. |
| Rmd | 8f3d29d | jens-daniel-mueller | 2020-12-02 | code cleaning and commenting |
| html | 148f0f4 | jens-daniel-mueller | 2020-12-01 | Build site. |
| Rmd | 728d584 | jens-daniel-mueller | 2020-12-01 | unabled all plots generation |
| html | 22d0127 | jens-daniel-mueller | 2020-12-01 | Build site. |
| Rmd | 3c7ddc8 | jens-daniel-mueller | 2020-12-01 | rebuild with flexible eras, A16 shifted and all plots = y |
| html | 0ff728b | jens-daniel-mueller | 2020-12-01 | Build site. |
| Rmd | 6287a18 | jens-daniel-mueller | 2020-12-01 | auto eras naming |
| html | 7ff39ce | jens-daniel-mueller | 2020-12-01 | Build site. |
| html | 88749c5 | jens-daniel-mueller | 2020-12-01 | Build site. |
| Rmd | 8eb582e | jens-daniel-mueller | 2020-12-01 | auto eras naming |
| html | cf19652 | jens-daniel-mueller | 2020-11-30 | Build site. |
| html | 196be51 | jens-daniel-mueller | 2020-11-30 | Build site. |
| Rmd | 7a4b015 | jens-daniel-mueller | 2020-11-30 | first rebuild on ETH server |
The following local parametrisations (i.e. relevant for this sensitivity run) were defined to run the analysis:
# neutral density thresholds to cut the Atlantic ocean into slabs
slabs_Atl <-
c(
-Inf,
# 26.00,
26.50,
26.75,
27.00,
27.25,
27.50,
27.75,
27.85,
27.95,
28.05,
28.10,
28.15,
28.20,
Inf
)
# neutral density thresholds to cut the Indo-Pacific ocean into slabs
slabs_Ind_Pac <-
c(-Inf,
26.00,
26.50,
26.75,
27.00,
27.25,
27.50,
27.75,
27.85,
27.95,
28.05,
28.10,
Inf)
# Predictors for MLR model
MLR_predictors <- c(
"sal",
"temp",
"aou",
"oxygen",
"phosphate",
"nitrate",
"silicate")
params_local <-
lst(
# ID of current sensitivity run
Version_ID = "v_XXX",
# GLODAP version used
GLODAPv2_version = "2021",
# f flags accepted for GLODAP data
flag_f = c(2,9,0),
# qc flags accepted for GLODAP data
flag_qc = c(1,0),
# Shallowest depth for data to be included in MLR fitting
depth_min = 150,
# Depth to extend the surface dcant estimate in mapping
depth_mapping = 200,
# Shallowest water depth for data to be included in MLR fitting
bottomdepth_min = 0,
# Lowest neutral density to map dcant with eMLR approach
gamma_min = Inf,
# CANYON-B offset threshold
# (factor applied to standard deviation of all cruise offsets)
CANYON_B_cruise_mean = 2,
# (factor applied to median of standard deviations of all cruise offsets)
CANYON_B_sample_SD = 3,
# minimum sampling depth to apply CANYON-B offset threshold
CANYON_B_depth = 0,
# threshold for the cruise rmse from a global MLR model of the target variable
target_global_rmse_max = 50,
# start years for eras
era_start = c(1989, 2000),
# end years for eras
era_end = c(1999, 2009),
# manually define tref1, set to NULL to use median year
tref1 = 1994,
# manually define tref2, set to NULL to use median year
tref2 = 2004,
# ID for basins for MLR fits (options: "2", "AIP", "5", "SO")
MLR_basins = "AIP",
# gap filling of NA values in GLODAP
gap_filling = "CANYON-B",
# rarefication approach
rarefication = "coarse_grid",
# rarefication approach threshold
rarefication_threshold = 50,
# Select the target variable for MLR, either "tco2", "cstar" or "cstar_tref"
MLR_target = "tco2",
# see above
MLR_predictors = MLR_predictors,
# Maxmimum number of MLR predictors
MLR_predictors_max = 7,
# Minimum number of MLR predictors
MLR_predictors_min = 3,
# Total number of MLR fits taken into account
MLR_number = 10,
# function used to fit linear regression models: "lm", "rlm"
MLR_function = "lm",
# Maximum VIF of fitted MLR models to be included
vif_max = 500,
# Criterion to select best MLR fits, either "rmse" or "aic"
MLR_criterion = "rmse",
# see above
slabs_Atl = slabs_Atl,
# see above
slabs_Ind_Pac = slabs_Ind_Pac,
# nutrient for cstar calculation
cstar_nutrient = "phosphate",
# Stoichiometric ratio of C to P
rCP = 117,
# Stoichiometric ratio of N to P
rNP = 16,
# Stoichiometric ratio of P to O (PO4* calculation)
rPO = 170,
# Offset P to O (PO4* calculation)
rPO_offset = 1.95,
# Preindustrial atmospheric pCO2
preind_atm_pCO2 = 280,
# generate a high number of diagnostic plots while running the analysis (y/n)
plot_all_figures = "n"
)# neutral density thresholds to cut the Atlantic ocean into slabs
slabs_Atl <- lst(
slabs_Atl =
c(-Inf,
26.00,
26.50,
26.75,
27.00,
27.25,
27.50,
27.75,
27.85,
27.95,
28.05,
28.10,
28.15,
28.20,
Inf
)
# slabs_Atl =
# c(-Inf,
# 26.50,
# 27.00,
# 27.50,
# 27.85,
# 28.05,
# 28.15,
# Inf
# )
)
# neutral density thresholds to cut the Indo-Pacific ocean into slabs
slabs_Ind_Pac <- lst(
slabs_Ind_Pac =
c(
-Inf,
26.00,
26.50,
26.75,
27.00,
27.25,
27.50,
27.75,
27.85,
27.95,
28.05,
28.10,
Inf
)
# slabs_Ind_Pac =
# c(
# -Inf,
# 26.50,
# 27.00,
# 27.50,
# 27.85,
# 28.05,
# Inf
# )
)
# Predictors for MLR model
MLR_predictors <- lst(c(
"sal",
"temp",
"aou",
"oxygen",
"phosphate",
"nitrate",
"silicate"))
# GLODAP version used
GLODAPv2_version = "2021"
# f flags accepted for GLODAP data
flag_f = lst(flag_f = c(0, 2, 9)
# flag_f = c(2)
)
# qc flags accepted for GLODAP data
flag_qc = lst(flag_qc = c(1, 0)
# flag_qc = c(1)
)
# Shallowest depth for data to be included in MLR fitting
depth_min = lst(
depth_min = 100
# depth_min = 150
)
# Depth to extend the surface dcant estimate in mapping
depth_mapping = lst(
depth_mapping = 200
)
# Shallowest water depth for data to be included in MLR fitting
bottomdepth_min = 0
# Lowest neutral density to map dcant with eMLR approach
gamma_min = lst(
# gamma_min = 26,
gamma_min = Inf
)
# CANYON-B offset threshold
# (factor applied to standard deviation of all cruise offsets)
CANYON_B_cruise_mean = lst(
CANYON_B_cruise_mean = 2
# CANYON_B_cruise_mean = 3,
# CANYON_B_cruise_mean = 1
)
# (factor applied to median of standard deviations of all cruise offsets)
CANYON_B_sample_SD = lst(
CANYON_B_sample_SD = 3
# CANYON_B_sample_SD = 3,
# CANYON_B_sample_SD = 2,
# CANYON_B_sample_SD = 1
)
# minimum sampling depth to apply CANYON-B offset threshold
CANYON_B_depth = 0
# threshold for the cruise rmse from a global MLR model of the target variable
target_global_rmse_max = lst(
target_global_rmse_max = 30
# target_global_rmse_max = 30,
# target_global_rmse_max = 20,
# target_global_rmse_max = 10
)
# start years for eras
era_start = lst(era_start = c(1989, 2000))
era_start = lst(era_start = c(1989, 2010))
era_start = lst(era_start = c(2000, 2010))
# end years for eras
era_end = lst(era_end = c(1999, 2009))
era_end = lst(era_end = c(1999, 2019))
era_end = lst(era_end = c(2009, 2019))
# manually define tref1, set to NULL to use median year
tref1 = 1994
tref1 = 2004
# manually define tref2, set to NULL to use median year
tref2 = 2004
tref2 = 2014
# ID for basins for MLR fits (options: "2", "AIP", "5", "SO")
MLR_basins = lst(
MLR_basins = "1",
MLR_basins = "2",
MLR_basins = "AIP",
MLR_basins = "5",
# MLR_basins = "SO",
# MLR_basins = "SO_5",
MLR_basins = "SO_AIP",
MLR_basins = "SO_2"
)
# gap filling of NA values in GLODAP
gap_filling = "CANYON-B"
# rarefication approach
rarefication = "coarse_grid"
# rarefication approach threshold
rarefication_threshold = lst(
# rarefication_threshold = 10,
# rarefication_threshold = 20,
# rarefication_threshold = 35,
rarefication_threshold = 50
)
# Select the target variable for MLR, either "tco2", "cstar" or "cstar_tref"
MLR_target = "cstar_tref"
# Maxmimum number of MLR predictors
MLR_predictors_max = 7
# Minimum number of MLR predictors
MLR_predictors_min = 2
# Total number of MLR fits taken into account
MLR_number = 10
# function used to fit linear regression models: "lm", "rlm"
MLR_function = "lm"
# Maximum VIF of fitted MLR models to be included
vif_max = lst(
# vif_max = Inf,
# vif_max = 1000,
vif_max = 500#,
# vif_max = 100,
# vif_max = 10
)
# Criterion to select best MLR fits, either "rmse" or "aic"
MLR_criterion = "rmse"
# nutrient for cstar calculation
cstar_nutrient = "phosphate"
# Stoichiometric ratio of C to P
rCP = 117
# Stoichiometric ratio of N to P
rNP = 16
# Stoichiometric ratio of P to O (PO4* calculation)
rPO = 170
# Offset P to O (PO4* calculation)
rPO_offset = 1.95
# Preindustrial atmospheric pCO2
preind_atm_pCO2 = 280
plot_all_figures = "n"
params_local_all <-
lst(
slabs_Atl,
slabs_Ind_Pac,
MLR_predictors,
GLODAPv2_version,
flag_f,
flag_qc,
depth_min,
depth_mapping,
bottomdepth_min,
gamma_min,
CANYON_B_cruise_mean,
CANYON_B_sample_SD,
CANYON_B_depth,
target_global_rmse_max,
era_start,
era_end,
tref1,
tref2,
MLR_basins,
gap_filling,
rarefication,
rarefication_threshold,
MLR_target,
MLR_predictors_max,
MLR_predictors_min,
MLR_number,
MLR_function,
vif_max,
MLR_criterion,
cstar_nutrient,
rCP,
rNP,
rPO,
rPO_offset,
preind_atm_pCO2,
plot_all_figures
) %>%
cross()
path_root <- "/nfs/kryo/work/jenmueller/emlr_cant/observations"
for (i in 1:length(params_local_all)) {
# i <- 5
Version_ID <- sprintf("v_30%02d", i)
params_local <- nth(params_local_all, i)
params_local$Version_ID <- Version_ID
# create folder structure
dir.create(paste(path_root, Version_ID, sep = "/"))
dir.create(paste(path_root, Version_ID, "data", sep = "/"))
dir.create(paste(path_root, Version_ID, "website", sep = "/"))
dir.create(paste(path_root, Version_ID, "figures", sep = "/"))
dir.create(paste(path_root, Version_ID, "figures/GLODAPv2_2020_subsetting",sep = "/"))
dir.create(paste(path_root, Version_ID, "figures/Cant_model_sections", sep = "/"))
dir.create(paste(path_root, Version_ID, "figures/Cruise_sections_histograms", sep = "/"))
dir.create(paste(path_root, Version_ID, "figures/eMLR_diagnostics", sep = "/"))
dir.create(paste(path_root, Version_ID, "figures/Observations_correlation", sep = "/"))
# write params_local files
params_local %>%
write_rds(file = paste(
path_root,
Version_ID,
"data",
"params_local.rds",
sep = "/"
))
params_local %>%
capture.output(file = paste(
path_root,
Version_ID,
"data",
"params_local.txt",
sep = "/"
))
}# neutral density thresholds to cut the Atlantic ocean into slabs
slabs_Atl <-
c(
-Inf,
26.00,
26.50,
26.75,
27.00,
27.25,
27.50,
27.75,
27.85,
27.95,
28.05,
28.10,
28.15,
28.20,
Inf
)
# neutral density thresholds to cut the Indo-Pacific ocean into slabs
slabs_Ind_Pac <-
c(-Inf,
26.00,
26.50,
26.75,
27.00,
27.25,
27.50,
27.75,
27.85,
27.95,
28.05,
28.10,
28.20,
28.30,
28.40,
Inf)
# Predictors for MLR model
MLR_predictors <- c(
"sal",
"temp",
"aou",
"nitrate",
"silicate",
"phosphate",
"phosphate_star")
params_local <-
lst(
# ID of current sensitivity run
Version_ID = "v_214",
# GLODAP version used
GLODAPv2_version = "2021",
# f flags accepted for GLODAP data
flag_f = c(0,2,9),
# qc flags accepted for GLODAP data
flag_qc = c(1,0),
# Shallowest depth for data to be included in MLR fitting
depth_min = 150,
# Shallowest water depth for data to be included in MLR fitting
bottomdepth_min = 0,
# Lowest neutral density to map dcant with eMLR approach
gamma_min = 26,
# CANYON-B offset threshold
# (factor applied to standard deviation of all cruise offsets)
CANYON_B_max = 3,
# minimum sampling depth to apply CANYON-B offset threshold
CANYON_B_depth = 1000,
# break years for eras, numbers indicate the upper end of the respective era
c_star_rmse_max = 50,
# start years for eras
era_start = c(1982, 2000),
# end years for eras
era_end = c(1999, 2009),
# manually define tref1, set to NULL to use median year
tref1 = 1994,
# manually define tref2, set to NULL to use median year
tref2 = 2004,
# ID for basins for MLR fits (options: "2", "AIP", "5", "SO")
MLR_basins = "SO",
# gap filling of NA values in GLODAP
gap_filling = "none",
# rarefication approach
rarefication = "coarse_grid",
# rarefication approach threshold
rarefication_threshold = 25,
# Select the target variable for MLR, either "tco2", "cstar" or "cstar_tref"
MLR_target = "cstar_tref",
# see above
MLR_predictors = MLR_predictors,
# Maxmimum number of MLR predictors
MLR_predictors_max = 5,
# Minimum number of MLR predictors
MLR_predictors_min = 2,
# Total number of MLR fits taken into account
MLR_number = 10,
# Maximum VIF of fitted MLR models to be included
vif_max = 500,
# Criterion to select best MLR fits, either "rmse" or "aic"
MLR_criterion = "rmse",
# see above
slabs_Atl = slabs_Atl,
# see above
slabs_Ind_Pac = slabs_Ind_Pac,
# nutrient for cstar calculation
cstar_nutrient = "phosphate",
# Stoichiometric ratio of C to P
rCP = 117,
# Stoichiometric ratio of N to P
rNP = 16,
# Stoichiometric ratio of P to O (PO4* calculation)
rPO = 170,
# Offset P to O (PO4* calculation)
rPO_offset = 1.95,
# Preindustrial atmospheric pCO2
preind_atm_pCO2 = 280,
# generate a high number of diagnostic plots while running the analysis (y/n)
plot_all_figures = "n"
)Folders for each new sensitivity run are automatically created.
Parametrisation criteria are locally stored and used throughout this sensitivity case.
params_local %>%
write_rds(here::here("data/auxillary",
"params_local.rds"))
sessionInfo()R version 4.0.3 (2020-10-10)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: openSUSE Leap 15.2
Matrix products: default
BLAS: /usr/local/R-4.0.3/lib64/R/lib/libRblas.so
LAPACK: /usr/local/R-4.0.3/lib64/R/lib/libRlapack.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] forcats_0.5.0 stringr_1.4.0 dplyr_1.0.5 purrr_0.3.4
[5] readr_1.4.0 tidyr_1.1.3 tibble_3.1.3 ggplot2_3.3.5
[9] tidyverse_1.3.0 workflowr_1.6.2
loaded via a namespace (and not attached):
[1] tidyselect_1.1.0 xfun_0.25 bslib_0.2.5.1 haven_2.3.1
[5] colorspace_2.0-2 vctrs_0.3.8 generics_0.1.0 htmltools_0.5.1.1
[9] yaml_2.2.1 utf8_1.1.4 blob_1.2.1 rlang_0.4.11
[13] jquerylib_0.1.4 later_1.2.0 pillar_1.6.2 withr_2.3.0
[17] glue_1.4.2 DBI_1.1.0 dbplyr_1.4.4 readxl_1.3.1
[21] modelr_0.1.8 lifecycle_1.0.0 cellranger_1.1.0 munsell_0.5.0
[25] gtable_0.3.0 rvest_0.3.6 evaluate_0.14 knitr_1.33
[29] httpuv_1.5.4 fansi_0.4.1 broom_0.7.9 Rcpp_1.0.5
[33] promises_1.1.1 backports_1.1.10 scales_1.1.1 jsonlite_1.7.1
[37] fs_1.5.0 hms_0.5.3 digest_0.6.27 stringi_1.5.3
[41] rprojroot_2.0.2 grid_4.0.3 here_0.1 cli_3.0.1
[45] tools_4.0.3 magrittr_1.5 sass_0.4.0 crayon_1.3.4
[49] whisker_0.4 pkgconfig_2.0.3 ellipsis_0.3.2 xml2_1.3.2
[53] reprex_0.3.0 lubridate_1.7.9 httr_1.4.2 assertthat_0.2.1
[57] rmarkdown_2.10 rstudioapi_0.13 R6_2.5.0 git2r_0.27.1
[61] compiler_4.0.3