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Knit directory: 2019-feature-selection/
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| Rmd | 9117eee | pat-s | 2019-08-31 | wflow_publish(knitr_in(“analysis/eval-performance.Rmd”), view = FALSE, |
| html | 1ec8768 | pat-s | 2019-08-17 | Build site. |
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| Rmd | e98cb01 | pat-s | 2019-07-10 | wflow_publish(knitr_in(“analysis/eval-performance.Rmd”), view = FALSE, |
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Warning: Expected 2 pieces. Additional pieces discarded in 12 rows [6, 15,
28, 37, 50, 59, 72, 81, 94, 103, 116, 125].Warning: Expected 2 pieces. Missing pieces filled with `NA` in 36 rows [1,
10, 19, 20, 21, 22, 23, 32, 41, 42, 43, 44, 45, 54, 63, 64, 65, 66, 67,
76, ...].| learner_group | task.id | filter | best |
|---|---|---|---|
| RF | NRI | Car | 3.395836e+01 |
| Ridge-CV | NRI | No Filter | 3.398002e+01 |
| SVM | HR-VI | Borda | 3.425352e+01 |
| SVM | VI | Car | 3.432839e+01 |
| SVM | VI | Relief | 3.447321e+01 |
| SVM | VI | Borda | 3.447795e+01 |
| SVM | NRI | Info | 3.447993e+01 |
| SVM | HR-NRI | Info | 3.456178e+01 |
| SVM | HR-VI | Info | 3.459625e+01 |
| SVM | HR-VI | Pearson | 3.460088e+01 |
| SVM | HR-NRI-VI | Car | 3.460558e+01 |
| SVM | VI | Info | 3.460841e+01 |
| SVM | HR-NRI | Car | 3.460913e+01 |
| SVM | HR-NRI-VI | Pearson | 3.461372e+01 |
| SVM | HR-VI | MRMR | 3.461530e+01 |
| SVM | VI | PCA | 3.461982e+01 |
| SVM | HR-NRI-VI | PCA | 3.461989e+01 |
| SVM | HR-NRI-VI | MRMR | 3.462083e+01 |
| SVM | HR-NRI | PCA | 3.462114e+01 |
| SVM | VI | No Filter | 3.462215e+01 |
| SVM | HR-VI | No Filter | 3.462215e+01 |
| SVM | HR-NRI-VI | No Filter | 3.462215e+01 |
| SVM | HR-NRI | No Filter | 3.462215e+01 |
| SVM | HR | No Filter | 3.462215e+01 |
| SVM | HR-VI | CMIM | 3.462215e+01 |
| SVM | HR | Pearson | 3.462215e+01 |
| SVM | HR-NRI-VI | CMIM | 3.462217e+01 |
| SVM | HR | MRMR | 3.462218e+01 |
| SVM | HR-NRI | Relief | 3.462221e+01 |
| SVM | HR-NRI | CMIM | 3.462244e+01 |
| SVM | HR-VI | PCA | 3.462254e+01 |
| SVM | HR | Info | 3.462257e+01 |
| SVM | HR | Borda | 3.462305e+01 |
| SVM | NRI | PCA | 3.462351e+01 |
| SVM | HR | CMIM | 3.463224e+01 |
| SVM | HR | PCA | 3.463501e+01 |
| SVM | VI | MRMR | 3.463931e+01 |
| SVM | HR-VI | Car | 3.464007e+01 |
| SVM | VI | Pearson | 3.466696e+01 |
| SVM | HR-NRI | MRMR | 3.467168e+01 |
| SVM | HR | Relief | 3.473794e+01 |
| RF | HR-NRI-VI | Car | 3.487906e+01 |
| RF | HR-NRI | Car | 3.624337e+01 |
| SVM | HR-NRI-VI | Info | 3.645960e+01 |
| SVM | HR-NRI | Pearson | 3.661547e+01 |
| RF | HR-NRI | PCA | 3.675564e+01 |
| RF | HR-NRI-VI | PCA | 3.677161e+01 |
| SVM | VI | CMIM | 3.689147e+01 |
| RF | NRI | Relief | 3.694367e+01 |
| RF | NRI | PCA | 3.697707e+01 |
| RF | HR-NRI-VI | Relief | 3.699850e+01 |
| RF | HR-NRI-VI | CMIM | 3.722205e+01 |
| RF | HR | Info | 3.733806e+01 |
| RF | NRI | CMIM | 3.738256e+01 |
| RF | HR-NRI | CMIM | 3.745529e+01 |
| SVM | HR | Car | 3.748511e+01 |
| RF | HR-NRI-VI | Pearson | 3.751241e+01 |
| RF | NRI | Info | 3.758917e+01 |
| RF | NRI | No Filter | 3.760933e+01 |
| RF | HR-NRI-VI | No Filter | 3.766138e+01 |
| RF | HR-NRI | Relief | 3.766880e+01 |
| RF | HR-NRI | No Filter | 3.779608e+01 |
| RF | HR-NRI | MRMR | 3.785355e+01 |
| RF | HR-NRI | Info | 3.788950e+01 |
| RF | HR-NRI-VI | Info | 3.790357e+01 |
| RF | NRI | MRMR | 3.799854e+01 |
| RF | HR-NRI-VI | MRMR | 3.804667e+01 |
| RF | HR-NRI-VI | Borda | 3.807996e+01 |
| RF | HR-NRI | Borda | 3.825948e+01 |
| RF | HR | Pearson | 3.832141e+01 |
| RF | NRI | Borda | 3.836565e+01 |
| RF | HR-NRI | Pearson | 3.847300e+01 |
| SVM | HR-NRI-VI | Borda | 3.848679e+01 |
| SVM | HR-NRI | Borda | 3.852141e+01 |
| RF | HR | CMIM | 3.852776e+01 |
| RF | NRI | Pearson | 3.854429e+01 |
| RF | HR | MRMR | 3.866124e+01 |
| RF | VI | Borda | 3.871599e+01 |
| RF | HR | Borda | 3.900111e+01 |
| RF | VI | Car | 3.904897e+01 |
| RF | HR-VI | Info | 3.947897e+01 |
| RF | VI | No Filter | 3.954081e+01 |
| RF | VI | Info | 3.968470e+01 |
| RF | HR-VI | No Filter | 4.032956e+01 |
| SVM | NRI | MRMR | 4.033104e+01 |
| SVM | NRI | Car | 4.051591e+01 |
| RF | HR-VI | Relief | 4.052704e+01 |
| RF | VI | CMIM | 4.056433e+01 |
| RF | HR | Car | 4.059982e+01 |
| RF | VI | MRMR | 4.062609e+01 |
| SVM | NRI | No Filter | 4.063177e+01 |
| RF | VI | Pearson | 4.065849e+01 |
| SVM | NRI | Pearson | 4.069154e+01 |
| RF | HR-VI | Borda | 4.071297e+01 |
| RF | VI | Relief | 4.074434e+01 |
| Ridge-CV | HR-NRI | No Filter | 4.088308e+01 |
| RF | HR-VI | MRMR | 4.099637e+01 |
| RF | HR-VI | CMIM | 4.101895e+01 |
| RF | HR-VI | Pearson | 4.108956e+01 |
| Ridge-CV | HR | No Filter | 4.113613e+01 |
| RF | HR-VI | Car | 4.144857e+01 |
| RF | VI | PCA | 4.145816e+01 |
| SVM | NRI | CMIM | 4.147648e+01 |
| RF | HR | Relief | 4.149197e+01 |
| SVM | NRI | Borda | 4.165125e+01 |
| RF | HR | No Filter | 4.211367e+01 |
| SVM | NRI | Relief | 4.229983e+01 |
| RF | HR-VI | PCA | 4.279080e+01 |
| SVM | HR-VI | Relief | 4.280473e+01 |
| RF | HR | PCA | 4.377630e+01 |
| SVM | HR-NRI-VI | Relief | 4.628830e+01 |
| Lasso-CV | HR | No Filter | 5.045350e+01 |
| Lasso-CV | HR-NRI | No Filter | 5.085543e+01 |
| Lasso-CV | NRI | No Filter | 5.118365e+01 |
| Lasso-CV | HR-NRI-VI | No Filter | 5.826330e+01 |
| Lasso-CV | VI | No Filter | 5.832904e+01 |
| Lasso-CV | HR-VI | No Filter | 5.832904e+01 |
| Ridge-MBO | HR-VI | No Filter | 5.855500e+01 |
| Ridge-MBO | VI | No Filter | 5.855500e+01 |
| Ridge-MBO | HR-NRI-VI | No Filter | 5.855500e+01 |
| Lasso-MBO | HR | No Filter | 5.855501e+01 |
| Lasso-MBO | NRI | No Filter | 5.855501e+01 |
| Lasso-MBO | HR-NRI | No Filter | 5.855501e+01 |
| Ridge-MBO | HR | No Filter | 5.855501e+01 |
| Ridge-MBO | NRI | No Filter | 5.855501e+01 |
| Ridge-MBO | HR-NRI | No Filter | 5.855501e+01 |
| Lasso-MBO | VI | No Filter | 5.855501e+01 |
| Lasso-MBO | HR-VI | No Filter | 5.855501e+01 |
| Lasso-MBO | HR-NRI-VI | No Filter | 5.855501e+01 |
| Ridge-CV | HR-NRI-VI | No Filter | 5.050256e+07 |
| Ridge-CV | HR-VI | No Filter | 5.503490e+07 |
| Ridge-CV | VI | No Filter | 5.566970e+07 |
Warning: Expected 2 pieces. Additional pieces discarded in 12 rows [6, 15,
28, 37, 50, 59, 72, 81, 94, 103, 116, 125].Warning: Expected 2 pieces. Missing pieces filled with `NA` in 36 rows [1,
10, 19, 20, 21, 22, 23, 32, 41, 42, 43, 44, 45, 54, 63, 64, 65, 66, 67,
76, ...].| task.id | learner.id | learner_group | filter | rmse.test.rmse |
|---|---|---|---|---|
| defoliation-all-plots-NRI | RF Car | RF | Car | 33.95836 |
| defoliation-all-plots-NRI | Ridge-CV | Ridge-CV | No Filter | 33.98002 |
| defoliation-all-plots-HR-VI | SVM Borda | SVM | Borda | 34.25352 |
| defoliation-all-plots-HR | Lasso-CV | Lasso-CV | No Filter | 50.45350 |
| defoliation-all-plots-HR-VI | Ridge-MBO | Ridge-MBO | No Filter | 58.55500 |
| defoliation-all-plots-HR | Lasso-MBO | Lasso-MBO | No Filter | 58.55501 |
R version 3.5.2 (2018-12-20)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: CentOS Linux 7 (Core)
Matrix products: default
BLAS: /opt/R/3.5.2/lib64/R/lib/libRblas.so
LAPACK: /usr/lib64/libopenblaso-r0.3.3.so
locale:
[1] C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] ggpubr_0.1.6 ggsci_2.9 ggrepel_0.8.0 ggplot2_3.1.0
[5] dplyr_0.8.0.1 magrittr_1.5 mlr_2.15.0 ParamHelpers_1.12
[9] tidyselect_0.2.5
loaded via a namespace (and not attached):
[1] storr_1.2.1 xfun_0.5 purrr_0.3.0
[4] splines_3.5.2 lattice_0.20-38 colorspace_1.4-0
[7] htmltools_0.3.6 yaml_2.2.0 survival_2.43-3
[10] rlang_0.3.4 R.oo_1.22.0 pillar_1.3.1
[13] txtq_0.1.4 glue_1.3.0 withr_2.1.2
[16] R.utils_2.8.0 plyr_1.8.4 stringr_1.4.0
[19] munsell_0.5.0 gtable_0.2.0 workflowr_1.4.0
[22] R.methodsS3_1.7.1 evaluate_0.13 labeling_0.3
[25] knitr_1.23 parallelMap_1.4 parallel_3.5.2
[28] highr_0.7 Rcpp_1.0.0 backports_1.1.3
[31] scales_1.0.0 filelock_1.0.2 checkmate_1.9.1
[34] fs_1.2.6 fastmatch_1.1-0 digest_0.6.18
[37] stringi_1.3.1 BBmisc_1.11 grid_3.5.2
[40] rprojroot_1.3-2 cli_1.1.0 tools_3.5.2
[43] base64url_1.4 lazyeval_0.2.1 tibble_2.0.1
[46] tidyr_0.8.2 crayon_1.3.4 whisker_0.3-2
[49] pkgconfig_2.0.2 Matrix_1.2-15 data.table_1.12.0
[52] drake_7.5.2 assertthat_0.2.0 rmarkdown_1.13
[55] R6_2.4.0 igraph_1.2.4 git2r_0.24.0
[58] compiler_3.5.2