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QBS 148 Introduction to statistical genetics

Exercise 1-a: run a GWAS

Exercise 1-b: GWAS power

Exercise 1-c: Genetic relationship matrix

Exercise 2-a: polygenic risk score

Exercise 2-b: fine mapping

Exercise 2-c: LDSC

Exercise 3-a: molecular QTL mapping

Exercise 3-b: GWAS + eQTL

Exercise 3-c: Mendelian randomization

Exercise 4-a: CNN model for DNA sequence

Exercise 4-b: Borzoi inference

Exercise 4-c: autoencoder for single cell data