Last updated: 2019-03-31

Checks: 2 0

Knit directory: fiveMinuteStats/analysis/

This reproducible R Markdown analysis was created with workflowr (version 1.2.0). The Report tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility. The version displayed above was the version of the Git repository at the time these results were generated.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:

Ignored files:
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    analysis/.Rhistory
    Ignored:    analysis/bernoulli_poisson_process_cache/

Untracked files:
    Untracked:  _workflowr.yml
    Untracked:  analysis/CI.Rmd
    Untracked:  analysis/gibbs_structure.Rmd
    Untracked:  analysis/libs/
    Untracked:  analysis/results.Rmd
    Untracked:  analysis/shiny/tester/
    Untracked:  docs/MH_intro_files/
    Untracked:  docs/citations.bib
    Untracked:  docs/figure/MH_intro.Rmd/
    Untracked:  docs/figure/hmm.Rmd/
    Untracked:  docs/hmm_files/
    Untracked:  docs/libs/
    Untracked:  docs/shiny/tester/

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the R Markdown and HTML files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view them.

File Version Author Date Message
html dbcff1f stephens999 2019-01-23 Build site.
Rmd 7a0ba80 stephens999 2019-01-23 workflowr::wflow_publish(“analysis/index.Rmd”)
html 3c642ff stephens999 2018-05-17 Build site.
Rmd e8e0399 stephens999 2018-05-17 wflow_publish(“analysis/index.Rmd”)
html ccb9962 stephens999 2018-05-03 Build site.
Rmd 5530e01 stephens999 2018-05-03 workflowr::wflow_publish(“analysis/index.Rmd”)
html 6053d26 stephens999 2018-04-23 Build site.
Rmd 1077c97 stephens999 2018-04-23 workflowr::wflow_publish(c(“analysis/index.Rmd”, “analysis/MH_intro.Rmd”,
html 30630b2 stephens999 2018-04-23 Build site.
Rmd 5c310c2 stephens999 2018-04-23 MH_intro.Rmd
html f995d0a stephens999 2018-04-23 Build site.
Rmd a7ec7b7 stephens999 2018-04-23 workflowr::wflow_publish(c(“analysis/index.Rmd”,
html d251967 stephens999 2018-04-23 Build site.
Rmd 9e15ba0 stephens999 2018-04-23 workflowr::wflow_publish(c(“analysis/index.Rmd”,
html d41d022 stephens999 2017-04-24 Build site.
Rmd f012c1d stephens999 2017-04-24 Files commited by wflow_commit.
html c1d0c3f stephens999 2017-04-17 update index
Rmd 72ef4ea stephens999 2017-04-17 Files commited by wflow_commit.
html c7e182b stephens999 2017-04-17 Build site.
Rmd 9f09eca stephens999 2017-04-17 Files commited by wflow_commit.
html 34bcc51 John Blischak 2017-03-06 Build site.
Rmd 2aa70fe John Blischak 2017-03-06 Manually udpate some Rmd files.
html fb0f6e3 stephens999 2017-03-03 Merge pull request #33 from mdavy86/f/review
html 20c6639 stephens999 2017-02-20 Build site.
Rmd d20b048 stephens999 2017-02-20 Files commited by wflow_commit.
html 9778b49 stephens999 2017-02-20 Build site.
Rmd 592db57 stephens999 2017-02-20 Files commited by wflow_commit.
Rmd 02d2d36 stephens999 2017-02-20 add shiny binomial example
html 02d2d36 stephens999 2017-02-20 add shiny binomial example
html 48bf85f stephens999 2017-01-28 Build site.
Rmd ca3b3b6 stephens999 2017-01-28 Files commited by wflow_commit.
html fbfa018 stephens999 2017-01-28 Build site.
Rmd 2c4f22e stephens999 2017-01-28 Files commited by wflow_commit.
html a19b65a stephens999 2017-01-24 Build site.
Rmd fc0336e stephens999 2017-01-24 Files commited by wflow_commit.
html c3b365a John Blischak 2017-01-02 Build site.
Rmd ae24830 stephens999 2016-09-04 add example of computing LR on different data
Rmd 966d6f6 stephens999 2016-05-17 Merge branch ‘gh-pages’ of into jhmarcus-gh-pages
Rmd 6bb4560 stephens999 2016-05-12 add gibbs sampling example
Rmd a72861e stephens999 2016-05-02 add integral
Rmd 153e684 stephens999 2016-05-02 add IS
Rmd 8466ce3 stephens999 2016-05-02 add gibbs sampling example
Rmd 47f75ca stephens999 2016-04-20 add BF and p value comparison
Rmd c5e07f5 Xiao Nan 2016-04-13 add shiny conjugate normal app link to index
Rmd ed83285 jhmarcus 2016-04-07 added popgen section to index and wright_fisher tutorials
Rmd f1dd5fc stephens999 2016-04-04 update index
Rmd 106d322 mbonakda 2016-02-24 add new notes to index
Rmd 294d219 stephens999 2016-02-16 add normal markov chain example
Rmd be2da01 stephens999 2016-02-15 add multivariate normal
Rmd 0ba385e mbonakda 2016-02-06 update index
Rmd d1b8aae jnovembre 2016-02-05 Changed sub-headings
Rmd dce7ece jnovembre 2016-02-05 modified index.html to add Poisson process and fix typo
Rmd 1187afb mbonakda 2016-02-02 fix typos
Rmd ac0ba21 mbonakda 2016-02-02 add to index
Rmd 313901b jnovembre 2016-01-31 Modified index and added html
Rmd ad8b7b5 mbonakda 2016-01-30 update names
Rmd 4e0c4fd mbonakda 2016-01-30 update index
Rmd 4335247 mbonakda 2016-01-23 fix index typo
Rmd 9d4269b mbonakda 2016-01-23 add simulating discrete chains to index
Rmd b0339a9 stephens999 2016-01-19 update index
Rmd 9156677 stephens999 2016-01-19 add multiclass example
Rmd ff6b857 mbonakda 2016-01-12 add asymptotic normality of MLE and wilks
Rmd 3ee2cf4 stephens999 2016-01-12 add likelihood function
Rmd d6f4bea stephens999 2016-01-12 add examples
Rmd 6feeb2e stephens999 2016-01-11 update index
Rmd 8b7278d stephens999 2016-01-11 add LR for continuous data
Rmd 93476ef stephens999 2016-01-07 update LR to make clear it is for discrete data
Rmd 8f61232 stephens999 2016-01-07 add simple LR example
Rmd f1b8c7c stephens999 2016-01-05 add likelihood and loglikelihood
Rmd 90df5f8 stephens999 2016-01-05 tidy up material related to ashlar by removing much of it
Rmd d3c8f4e jhsiao999 2015-12-12 fix typo
Rmd 10bba89 jhsiao999 2015-12-12 add tutorial
Rmd 99f4499 jhsiao999 2015-12-12 add a Rmarkdown example
Rmd 1b891a0 jhsiao999 2015-12-12 first commit


This site was created with R Markdown