Last updated: 2022-11-30

Checks: 7 0

Knit directory: ampel-leipzig-meld/

This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


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The results in this page were generated with repository version e1aebf7. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    _targets/
    Ignored:    analysis/article.md
    Ignored:    container/
    Ignored:    logs/
    Ignored:    scripts/R.sh

Untracked files:
    Untracked:  analysis/bibliography/bibliography.bib.sav.tmp
    Untracked:  submission/

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.


These are the previous versions of the repository in which changes were made to the R Markdown (analysis/histograms.Rmd) and HTML (docs/histograms.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
Rmd fba81f5 Sebastian Gibb 2022-11-27 feat: add MELD 3.0 score
html 65d58c4 Sebastian Gibb 2022-07-18 chore: rebuild site
html fb43d01 Sebastian Gibb 2022-06-19 chore: rebuild site
html ebe29cf Sebastian Gibb 2022-06-16 chore: rebuild site
html 8035219 Sebastian Gibb 2022-06-15 chore: rebuild site
html d3e9462 Sebastian Gibb 2022-06-06 chore: rebuild site
html b20484a Sebastian Gibb 2022-06-06 chore: rebuild site
html 983ec69 Sebastian Gibb 2022-03-17 chore: rebuild site
Rmd 9490b1d Sebastian Gibb 2022-03-17 fix: MELD probailities
html 373e7d8 Sebastian Gibb 2021-10-20 chore: rebuild site
html df8964f Sebastian Gibb 2021-10-15 chore: rebuild site
html afa48d9 Sebastian Gibb 2021-08-07 chore: rebuild site
Rmd 4478f6a Sebastian Gibb 2021-08-02 Revert "fix: working directory for targets"
Rmd cac14f6 Sebastian Gibb 2021-08-02 fix: working directory for targets
Rmd 3957af7 Sebastian Gibb 2021-08-02 refactor: move common yaml headers into _site.yml
html 3aab3e1 Sebastian Gibb 2021-08-01 chore: rebuild site
html 3810a79 Sebastian Gibb 2021-07-15 chore: rebuild site
html 13b68ca Sebastian Gibb 2021-07-04 chore: rebuild site
html 2869556 Sebastian Gibb 2021-07-02 chore: rebuild site
html d9c37ec Sebastian Gibb 2021-07-02 chore: rebuild site
Rmd cb0dbf6 Sebastian Gibb 2021-07-02 feat: add MELD histograms
html 81fcc75 Sebastian Gibb 2021-06-11 chore: rebuild site
html 783c49f Sebastian Gibb 2021-06-11 chore: rebuild site
Rmd 5ba50b5 Sebastian Gibb 2021-06-11 refactor: move boxplots in separate report
html c748698 Sebastian Gibb 2021-06-11 chore: rebuild site
Rmd 65dd1ac Sebastian Gibb 2021-06-11 fix: size and color of the beeswarm plots
Rmd d174eaf Sebastian Gibb 2021-06-11 fix: remove useless headings
html eb90d2e Sebastian Gibb 2021-06-11 chore: rebuild site
Rmd 60372c0 Sebastian Gibb 2021-06-11 feat: add zlog_data
html aac7ea8 Sebastian Gibb 2021-06-11 chore: rebuild site
html 602e714 Sebastian Gibb 2021-06-11 chore: rebuild site
Rmd 3b9b8b9 Sebastian Gibb 2021-06-11 feat: use imputed data
html 24a733a Sebastian Gibb 2021-06-11 docs: rebuild site
html 945a45a Sebastian Gibb 2021-06-11 chore: rebuild site
Rmd c7866e7 Sebastian Gibb 2021-06-11 feat: add basic targets workflow

library("targets")
tar_load(imp_data)
tar_load(zlog_data)

.hist <- function(
    ..., xlab = deparse(substitute(x)), main = paste("Histogram of", xlab),
    col = palette.colors(2L)[2L]
)hist(..., main = main, xlab = xlab, col = col)

.qqnorm <- function(y, ..., yname = deparse(substitute(y)),
    main = paste0("Normal Q-Q Plot (", yname, ")"),
    ylab = paste0("Sample Quantiles (", yname, ")"),
    col = palette.colors(2L)[2L]) {
    qqnorm(y, ..., main = main, ylab = ylab, col = col, pch = 19L)
    qqline(y, ..., col = col)
}

1 Age

.hist(imp_data$Age, xlab = "Age")

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
945a45a Sebastian Gibb 2021-06-11

2 Raw Data (imputed)

labv <- sort(grep("_[SECQ]$", colnames(imp_data), value = TRUE))

for (v in labv) {
    cat("\n\n##", v , "\n\n")
    .hist(imp_data[[v]], main = paste0("Histogram of ", v), xlab = v)
    .qqnorm(imp_data[[v]], yname = v)
}

2.1 ALAT_S

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.2 ALB_S

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.3 AP_S

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.4 ASAT_S

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.5 B_MPV_E

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.6 B_PLT_E

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.7 B_WBC_E

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.8 BILI_S

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.9 BILID_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.10 CA_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.11 CHE_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.12 CHOLG_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

2.13 CL_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11
602e714 Sebastian Gibb 2021-06-11
945a45a Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.14 CRE_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.15 CRP_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.16 CYSC_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.17 GGT_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.18 IL6_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.19 INR_C

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.20 NA_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.21 P_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.22 PALB_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.23 PROT_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.24 PTH_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

2.25 VDT_OH_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3 Zlog Data (imputed)

for (v in labv) {
    cat("\n\n##", v , "\n\n")
    .hist(zlog_data[[v]], main = paste0("Histogram of ", v), xlab = v)
    .qqnorm(zlog_data[[v]], yname = v)
}

3.1 ALAT_S

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.2 ALB_S

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.3 AP_S

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.4 ASAT_S

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.5 B_MPV_E

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.6 B_PLT_E

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.7 B_WBC_E

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.8 BILI_S

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.9 BILID_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.10 CA_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.11 CHE_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.12 CHOLG_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.13 CL_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.14 CRE_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.15 CRP_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.16 CYSC_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.17 GGT_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.18 IL6_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.19 INR_C

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.20 NA_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.21 P_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.22 PALB_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.23 PROT_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.24 PTH_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
b20484a Sebastian Gibb 2022-06-06
3810a79 Sebastian Gibb 2021-07-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

3.25 VDT_OH_S

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
eb90d2e Sebastian Gibb 2021-06-11

Version Author Date
ebe29cf Sebastian Gibb 2022-06-16
8035219 Sebastian Gibb 2022-06-15
783c49f Sebastian Gibb 2021-06-11
eb90d2e Sebastian Gibb 2021-06-11

4 MELD Scores (imputed)

meldv <-
    c(paste0("ScoreMeld", c("", "Unos", "Na", "NaUnos", "3")),
      paste0("SurvProbMeld", c("Unos", "NaUnos", "3", "Plus7")))
for (v in meldv) {
    cat("\n\n##", v , "\n\n")
    .hist(zlog_data[[v]], main = paste0("Histogram of ", v), xlab = v)
    .qqnorm(zlog_data[[v]], yname = v)
}

4.1 ScoreMeld

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
d9c37ec Sebastian Gibb 2021-07-02

4.2 ScoreMeldUnos

Version Author Date
afa48d9 Sebastian Gibb 2021-08-07
3810a79 Sebastian Gibb 2021-07-15
13b68ca Sebastian Gibb 2021-07-04
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
afa48d9 Sebastian Gibb 2021-08-07
3810a79 Sebastian Gibb 2021-07-15
13b68ca Sebastian Gibb 2021-07-04
d9c37ec Sebastian Gibb 2021-07-02

4.3 ScoreMeldNa

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
d9c37ec Sebastian Gibb 2021-07-02

4.4 ScoreMeldNaUnos

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
3810a79 Sebastian Gibb 2021-07-15
d9c37ec Sebastian Gibb 2021-07-02

4.5 ScoreMeld3

Version Author Date
983ec69 Sebastian Gibb 2022-03-17
3810a79 Sebastian Gibb 2021-07-15
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
983ec69 Sebastian Gibb 2022-03-17
3810a79 Sebastian Gibb 2021-07-15
d9c37ec Sebastian Gibb 2021-07-02

4.6 SurvProbMeldUnos

Version Author Date
983ec69 Sebastian Gibb 2022-03-17
afa48d9 Sebastian Gibb 2021-08-07
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
983ec69 Sebastian Gibb 2022-03-17
afa48d9 Sebastian Gibb 2021-08-07
d9c37ec Sebastian Gibb 2021-07-02

4.7 SurvProbMeldNaUnos

Version Author Date
983ec69 Sebastian Gibb 2022-03-17
afa48d9 Sebastian Gibb 2021-08-07
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
983ec69 Sebastian Gibb 2022-03-17
afa48d9 Sebastian Gibb 2021-08-07
d9c37ec Sebastian Gibb 2021-07-02

4.8 SurvProbMeld3

Version Author Date
afa48d9 Sebastian Gibb 2021-08-07
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
afa48d9 Sebastian Gibb 2021-08-07
d9c37ec Sebastian Gibb 2021-07-02

4.9 SurvProbMeldPlus7

Version Author Date
afa48d9 Sebastian Gibb 2021-08-07
d9c37ec Sebastian Gibb 2021-07-02

Version Author Date
afa48d9 Sebastian Gibb 2021-08-07
d9c37ec Sebastian Gibb 2021-07-02

sessionInfo()
R version 4.2.0 (2022-04-22)
Platform: x86_64-unknown-linux-gnu (64-bit)

Matrix products: default
BLAS/LAPACK: /gnu/store/ras6dprsw3wm3swk23jjp8ww5dwxj333-openblas-0.3.18/lib/libopenblasp-r0.3.18.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] targets_0.12.1

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.8.3      highr_0.9         pillar_1.7.0      compiler_4.2.0   
 [5] bslib_0.3.1       later_1.3.0       jquerylib_0.1.4   git2r_0.30.1     
 [9] workflowr_1.7.0   tools_4.2.0       digest_0.6.29     jsonlite_1.8.0   
[13] evaluate_0.15     lifecycle_1.0.1   tibble_3.1.7      pkgconfig_2.0.3  
[17] rlang_1.0.2       igraph_1.3.1      cli_3.3.0         yaml_2.3.5       
[21] xfun_0.31         fastmap_1.1.0     withr_2.5.0       stringr_1.4.0    
[25] knitr_1.39        fs_1.5.2          vctrs_0.4.1       sass_0.4.1       
[29] tidyselect_1.1.2  rprojroot_2.0.3   data.table_1.14.2 glue_1.6.2       
[33] R6_2.5.1          processx_3.5.3    fansi_1.0.3       base64url_1.4    
[37] rmarkdown_2.14    bookdown_0.26     purrr_0.3.4       callr_3.7.0      
[41] magrittr_2.0.3    whisker_0.4       codetools_0.2-18  ps_1.7.0         
[45] backports_1.4.1   promises_1.2.0.1  ellipsis_0.3.2    htmltools_0.5.2  
[49] httpuv_1.6.5      utf8_1.2.2        stringi_1.7.6     crayon_1.5.1