Last updated: 2020-11-20

Checks: 7 0

Knit directory: Cant_eMLR/

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Ignored files:
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    Ignored:    data/auxillary/
    Ignored:    data/eMLR/
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    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1996-06-07_n_1030_cruise_288_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1996-06-25_n_242_cruise_618_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1996-09-09_n_552_cruise_68_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1996-09-26_n_85_cruise_40_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1996-11-17_n_738_cruise_258_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-04-26_n_20_cruise_648_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-05-26_n_1040_cruise_160_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-05-27_n_309_cruise_42_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-06-14_n_1462_cruise_259_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-07-30_n_1132_cruise_260_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-08-25_n_798_cruise_261_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-11-22_n_211_cruise_464_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-12-20_n_514_cruise_434_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-02-11_n_1024_cruise_341_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-03-14_n_196_cruise_69_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-06-07_n_44_cruise_448_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-06-28_n_52_cruise_449_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-08-03_n_187_cruise_450_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-10-09_n_33_cruise_409_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-11-24_n_251_cruise_465_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-01-07_n_120_cruise_466_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-05-17_n_107_cruise_467_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-05-31_n_338_cruise_461_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-06-23_n_381_cruise_46_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-09-05_n_89_cruise_468_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-10-14_n_33_cruise_410_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-01-20_n_186_cruise_472_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-05-22_n_433_cruise_24_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-14_n_26_cruise_411_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-16_n_380_cruise_437_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-26_n_605_cruise_82_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-06-15_n_1143_cruise_83_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-06-23_n_381_cruise_476_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-08-14_n_870_cruise_477_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-09-04_n_32_cruise_478_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-09-12_n_392_cruise_438_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-11-17_n_912_cruise_70_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-04-01_n_46_cruise_682_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-05-29_n_26_cruise_706_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-06-27_n_147_cruise_263_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-06-28_n_769_cruise_392_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-03-13_n_768_cruise_484_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-07-03_n_14_cruise_591_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-07-23_n_20_cruise_592_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-08-10_n_1153_cruise_56_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-09-07_n_2722_cruise_486_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-10-06_n_1055_cruise_264_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-10-10_n_102_cruise_633_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-11-03_n_976_cruise_265_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-11-19_n_1221_cruise_487_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-01-01_n_1682_cruise_488_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-01-23_n_13_cruise_593_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-06_n_61_cruise_489_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-22_n_913_cruise_695_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-29_n_59_cruise_556_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-05-22_n_202_cruise_167_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-05-26_n_10_cruise_463_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-06-20_n_14_cruise_594_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-06-22_n_806_cruise_393_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-07-12_n_63_cruise_595_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-07-20_n_3228_cruise_272_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-08-17_n_956_cruise_490_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-10-23_n_83_cruise_492_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-10-27_n_59_cruise_596_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-11-27_n_926_cruise_493_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-10_n_691_cruise_72_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-24_n_14_cruise_597_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-25_n_2240_cruise_350_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-25_n_59_cruise_558_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-03-08_n_67_cruise_494_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-04-28_n_60_cruise_559_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-05-25_n_890_cruise_683_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-05-30_n_242_cruise_168_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-06-11_n_1558_cruise_495_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-07-17_n_66_cruise_599_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-14_n_1837_cruise_266_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-21_n_499_cruise_666_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-30_n_178_cruise_496_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-10-25_n_69_cruise_600_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-12-08_n_2641_cruise_497_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-01-24_n_68_cruise_561_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-03-08_n_1719_cruise_306_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-04-25_n_38_cruise_562_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-04_n_587_cruise_25_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-16_n_1_cruise_602_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-21_n_968_cruise_498_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-07-11_n_37_cruise_603_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-10-26_n_68_cruise_604_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-01-23_n_85_cruise_564_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-02-28_n_1671_cruise_352_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-03-09_n_1058_cruise_501_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-04-11_n_1995_cruise_353_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-04-30_n_63_cruise_565_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-05-31_n_600_cruise_327_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-07-03_n_47_cruise_606_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-07-31_n_33_cruise_607_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-08-14_n_1209_cruise_502_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-09-16_n_478_cruise_667_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-09-18_n_299_cruise_503_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-10-30_n_1828_cruise_504_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-10-31_n_63_cruise_566_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-12-07_n_1654_cruise_505_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-01-08_n_551_cruise_74_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-01-16_n_3261_cruise_345_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-02-01_n_79_cruise_608_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-02-21_n_1640_cruise_354_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-03-02_n_996_cruise_385_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-03-15_n_927_cruise_19_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-04-06_n_841_cruise_75_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-04-28_n_57_cruise_568_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-05-28_n_416_cruise_171_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-06-22_n_868_cruise_394_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-10-21_n_363_cruise_506_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-01-07_n_345_cruise_674_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-02-16_n_672_cruise_675_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-02-27_n_1170_cruise_84_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-03-29_n_1063_cruise_676_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-04-17_n_3605_cruise_355_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-05-18_n_2663_cruise_507_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-05-23_n_317_cruise_172_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-07-12_n_145_cruise_635_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-08-02_n_127_cruise_26_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-11-10_n_319_cruise_63_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-11-18_n_158_cruise_1059_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-01-01_n_4235_cruise_273_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-01-25_n_932_cruise_699_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-03-30_n_2340_cruise_346_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-04-03_n_377_cruise_703_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-05-21_n_266_cruise_173_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-05-26_n_168_cruise_1085_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-06-19_n_842_cruise_395_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-06-26_n_157_cruise_1063_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-07-25_n_1356_cruise_609_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-08-19_n_88_cruise_1064_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-10-16_n_161_cruise_2028_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-11-15_n_87_cruise_2029_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-12-22_n_1297_cruise_20_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-01-17_n_108_cruise_1065_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-01-30_n_270_cruise_1087_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-02-18_n_121_cruise_1066_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-03-21_n_2140_cruise_295_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-05-18_n_516_cruise_174_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-06-25_n_250_cruise_1067_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-07-07_n_2466_cruise_517_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-10-08_n_887_cruise_347_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-10-26_n_214_cruise_2031_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-01-28_n_253_cruise_1090_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-02-06_n_591_cruise_1002_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-02-19_n_242_cruise_1069_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-04-03_n_1103_cruise_329_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-04-15_n_111_cruise_2033_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-05-01_n_1390_cruise_330_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-06-07_n_152_cruise_1029_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-06-26_n_388_cruise_1092_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-07-05_n_715_cruise_1031_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-07-20_n_793_cruise_1071_.png
    Modified:   output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-08-14_n_1250_cruise_518_.png
    Deleted:    output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-11-10_n_191_cruise_1073_.png
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Rmd 39d06f0 jens-daniel-mueller 2020-08-11 created config navbar element

1 Variables

Variables from source data files are converted and harmonized to satisfy following naming convention throughout the project:

  • coordinates on 1x1 degree grid

    • lon: longitude (20.5 to 379.5 °E)
    • lat: latitude (-89.5 to 89.5 °N)
  • depth: water depth (m)

  • bottomdepth: bottomdepth (m)

  • sal: salinity (Check scales!)

  • tem: insitu temperature in deg C (Check scales!)

  • theta: potential temperature in deg C (Check scales!)

  • gamma: neutral density

  • phosphate

  • nitrate

  • silicate

  • oxygen

  • aou

  • tco2

  • talk

  • cant: anthropogenic CO2 (mol kg-1)

  • cstar: C* (mol kg-1)

2 Variable and data set post fix

  • _mean: mean value
  • _sd: standard deviation
  • _inv: column inventory
  • _pos: positive values only (ie negative values set to zero)

3 Data sets / objects

4 Chunk label naming within .Rmd files

  • read_xxx: open new data set
  • clean_xxx: subset rows of a data set
  • calculate_xxx: perform calculations on a data set (add or modify rows)
  • write_xxx: write summarized data file to disk
  • chunks producing plots are named according to the plot content, because the generated plot file will be named after the chunk

5 Folder structure

  • data: contains all data, not synced to Github
    • subfolder for each data product
      • _summarized_data_files: data sets created along analysis

6 Open tasks

  • check temperature and salinity scales

sessionInfo()
R version 4.0.2 (2020-06-22)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18363)

Matrix products: default

locale:
[1] LC_COLLATE=English_Germany.1252  LC_CTYPE=English_Germany.1252   
[3] LC_MONETARY=English_Germany.1252 LC_NUMERIC=C                    
[5] LC_TIME=English_Germany.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] workflowr_1.6.2

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.5      rstudioapi_0.11 whisker_0.4     knitr_1.30     
 [5] magrittr_1.5    R6_2.4.1        rlang_0.4.7     stringr_1.4.0  
 [9] tools_4.0.2     xfun_0.16       git2r_0.27.1    htmltools_0.5.0
[13] ellipsis_0.3.1  rprojroot_1.3-2 yaml_2.2.1      digest_0.6.25  
[17] tibble_3.0.3    lifecycle_0.2.0 crayon_1.3.4    later_1.1.0.1  
[21] vctrs_0.3.2     promises_1.1.1  fs_1.4.2        glue_1.4.1     
[25] evaluate_0.14   rmarkdown_2.3   stringi_1.4.6   compiler_4.0.2 
[29] pillar_1.4.6    backports_1.1.8 httpuv_1.5.4    pkgconfig_2.0.3